Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00569 ATGGCCGTAGAAAATGGAGAGAAAGTTGAGGTTGCTTTGAGTGAAGTTGCAGAGGCAAAGCCAAAGAAGAAGGATTGGGTTGTTTTGTCTCTCAGAGTGGTTGCGTTTTTGGCCACTGCATCTGCAACACTTCTCATGGCTCTCAACAAACAGACCAAAAGCTTCGTAGTTGCCAACGTTGGTAGCACTCCAATAACAGCAACTCTTGCTGCAAACTTTAACCAAACTCCGGCTTTTGTGTTCTTTGTTGTAGCAAATGCAAATGCAAGTCTGCATAATTTGGTGATGATAGCAATCGAAGTGTTAGGACCCCAATATGATTACAAAGGACTCAGGCTTCTCTTCATTGCAATATTAGACATGATGGCTATGGCTCTGGCATCAGCTGGTGATGGTGCAGCAACATTCATGTCAGAATTGGGAAAAAATGGTAACTCACATGCAAGATGGGATAAGATATGTGACAAATTTCAAACCTATTGCAACAAAAGTGGTGCTGCCCTTCTTGTCTCTTTCATTGGCTTCATTCTCCTCCTCATTATTTCAGTCATGTCCATCATCAAATTGCTCAAGCCAAATCGCATCAACCATGCTTCTCCATAG 603 0.4245 MAVENGEKVEVALSEVAEAKPKKKDWVVLSLRVVAFLATASATLLMALNKQTKSFVVANVGSTPITATLAANFNQTPAFVFFVVANANASLHNLVMIAIEVLGPQYDYKGLRLLFIAILDMMAMALASAGDGAATFMSELGKNGNSHARWDKICDKFQTYCNKSGAALLVSFIGFILLLIISVMSIIKLLKPNRINHASP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00569 200 NCBIfam plant integral membrane protein TIGR01569 29 189 IPR006459 -
Vimu10g00569 200 PANTHER CASP-LIKE PROTEIN 1U1 19 189 IPR044173 -
Vimu10g00569 200 Pfam Casparian strip membrane protein domain 23 177 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00569 Vimu-Chr10 4682287 4683903 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00569 - - gmx:100792043 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00569 10 4682287 4683903 Vimu10g00569 10 4682287 4683903 ECH