Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00554 GCGTTTGGAACATGCCATTGCACAGTGTTTAGTGTTGAAACCCTTTTTCCCCTTTGTCCAAACCCAGCAAATAAAATGATTAACAAACCTCTTTTTCTAACATATGTGTACTTGTTCATGTACATCTTGCTCTCATCCGGCGTCATTTTGTACAACAAGTGGGTTTTGTCGCCGAAATACTTTAACTTTCCCCTTCCCATAACGCTCACCATGATTCACATGGCATTCTCTGGGGCAGTGACATTTTTTCTTGTTCGGGTCTTTAAGATTGTGTCTCCTGTCAAAATGACATTTGAAATCTACGCAACTTGTGTGGTACCAATAAGTGCTTTCTTTGCATCAAGTCTTTGGTTTGGTAACACTGCCTACTTGCACATCTCCGTGGCTTTTATCCAGATGCTCAAAGCTCTGATGCCGGTGGCAACTTTCCTTATGGCTGTTTTGTGCGGCATTGACAAAGCAAGGTGTGATGTGTTCTTGAACATGTTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCGTATGGGGAAATTCATTTTAATACAGTTGGTACAGTTTACCAGGTCACAGGCATCTTTGCAGAAGCTCTAAGACTGGTCTTAACACAAGTCCTTCTGCAGAAAAAGGGGCTGACTTTAAATCCTATTACAAGCCTATATTACATAGCTCCCTGCAGTTTTGTGTTTCTCTTTGTGCCTTGGTACCTTTTGGAGAAGCCAGTAATGGAAGTTTCACAGATTCAGTTTAATTTCTGGATCTTCTTTTCCAATGCCATATGTGCACTAGCCTTGAACTTCTCAATTTTCTTAGTCATTGGTCGAACTGGTGCTGTAACCATCCGGGTTGCTGGTGTGCTTAAAGACTGGATATTAATAGCTCTTTCCACTGTTATATTCCCAGAATCTACAATAACTGGGTTGAACATAATTGGTTATGCAATTGCACTATGTGGAGTAGTGATGTACAACTACATAAAGGTTAGGGATGTAAGGGCCTCTCAATTGCCTGTTGAAACTATTCCAGATCGGATCACAAAGGACTGGAAATTCGAGAAGAAGTCATCTGATATTTACGTGCCAGATAACATTGGTGAGAATGAGGGAAGCAGTGGAGGTAATGGAACATCATCTGATATGAAAATTGATGAAGAAACACCACTTATTTCATCATCAAGGTTATCTCATATTGGACGTACGCAGTTAACCAACCAATATGCAATAGGAAAGTGA 1227 0.4075 AFGTCHCTVFSVETLFPLCPNPANKMINKPLFLTYVYLFMYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVTFFLVRVFKIVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVLCGIDKARCDVFLNMLLVSVGVVISSYGEIHFNTVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFFSNAICALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVRDVRASQLPVETIPDRITKDWKFEKKSSDIYVPDNIGENEGSSGGNGTSSDMKIDEETPLISSSRLSHIGRTQLTNQYAIGK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00554 408 Pfam Triose-phosphate Transporter family 36 322 IPR004853 -
Vimu10g00554 408 PANTHER SOLUTE CARRIER FAMILY 35 35 328 - -
Vimu10g00554 408 MobiDBLite consensus disorder prediction 365 379 - -
Vimu10g00554 408 MobiDBLite consensus disorder prediction 358 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00554 Vimu-Chr10 4550663 4554485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00554 25 405 Organic Solute Cotransporters AT3G17430 82.940 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00554 - - gmx:100812996 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00554 10 4550663 4554485 Vimu10g00554 10 4550663 4554485 ECH
Vimu7g01634 7 15210153 15212630 Vimu10g00554 10 4550663 4554485 PCT