Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00538 ATGGAGGATCAATCTTCATCATCATCATCATCATCATCATCATCATCATCAAAATCAAAAACAGCTGCTTTGGATCAACCCCTTCACTTAATGGGGTTTGAAATTGAAGAATTATCACCACAGAAAATCTCTGGCCGTCTCCCTGTAACCCAGAAGTGCTGCCAGCCATTCAAGGTGCTTCATGGAGGGGTTTCGGCATTGATAGCAGAGTCTTTGGCAAGCATGGGAGCACACATGGCTTCAGGGTATAAAAGAGTCGCTGGAATTCAACTCAGCATCAACCATTTGAAACGAGCTGAAATGGGTGACTTGGTGTACGCAGAAGCTAAACCTTTAAATCTTGGCAAAACAATTCAGGTGTGGGAGGTGCTACTATGGAAGATTGATCCTTCAGACTCACAAAGAAGATCCTTGGTCTCATCTTCTAGAGTAACTCTAGTAACCAATATGCCTGTCCCAGTTAATGCAAAAGATGCTGCTGATCCATTAAAGAAGTTTGCAAAACTCTAA 510 0.4255 MEDQSSSSSSSSSSSSSKSKTAALDQPLHLMGFEIEELSPQKISGRLPVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEMGDLVYAEAKPLNLGKTIQVWEVLLWKIDPSDSQRRSLVSSSRVTLVTNMPVPVNAKDAADPLKKFAKL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00538 169 MobiDBLite consensus disorder prediction 1 21 - -
Vimu10g00538 169 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 14 149 - -
Vimu10g00538 169 Pfam Thioesterase superfamily 58 129 IPR006683 -
Vimu10g00538 169 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 28 147 IPR029069 -
Vimu10g00538 169 Gene3D Hotdog Thioesterase 11 149 - -
Vimu10g00538 169 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 9 168 - -
Vimu10g00538 169 CDD PaaI_thioesterase 30 126 - -
Vimu10g00538 169 NCBIfam hotdog fold thioesterase 29 123 IPR003736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00538 Vimu-Chr10 4377421 4380001 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00538 K19222 - gmx:100527403 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00538 10 4377421 4380001 Vimu10g00538 10 4377421 4380001 ECH