Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00525 ATGGCTGCTACCAAATCCAATACCACCATCAACAATCTCTCTGACGATTCCCTCACCGAAATCTTCTGCAAACTGCCATGCAAATCCCTTTTCTCATGCAAGAGCGTTTCAAAGCATTGGCTCACACTCATTTCCAATACCAATTTCCATTCCCTATACCTCACTCACCAACACACCCTCTTCCATAAAATCCAATCCCAAGGAGAAGATCCTGATCAACCCAGTTTCATTCTAAAGCCATACAATGCCCTCGTCATAGCACCAAATTTACCCTCTCTTCAACTTGGCTCTCTCGAAAACCACCTCTCTCTAACCTCCCTAGGCTCAGATTTCGAACCGGCTAACATCGTACCACAACTACGGTCTGTGTTAAAGTTTGTTTTTGCATGTTCCAACGGTTTGCTCGTATATGGAAATCCTCGTCCACGTCACAAATGCGTATACCACGTACGTAACCCACTTACAAAGGATTCATTGAAACTCCCTTCTGCTCCAACTCTCTGTGACCACGCTGGGGTTCTCGTGGGTTTCATGTGCGACCCTTATTACTCTCTTGCAAAAGAGAACTCCGGCCTATCTATCGTTCCCACTTCTGAACGAAGGTTCAGGGTGGTTCGCATCCCTGCGTTCAGCGACACGAGGGTTACGTTTGATGTTGAGGTTTTCTCTTCCGAGACAGGGGAATGGAAGCGATTTGTGGTGTCGTGTCCACAGGGGTTTGCGTGTGGGTTTTTTCTGACGTCATCGAGCGTTGAGCACGAAGGGAAGTTGTACTTCATGGGTGGAGGGAGGGTTCTCGTGTATGACCCTTATGATGATGAGTGTGTGGCTTCTGTGATTGAACTTCCCCGTGGCTTTGGCGAAGCGTATAGAGGGTGCCTTGGGGTTTCTTGTGGAAAGTTGCAGTTATCTGAGTTCCCTATCTCACCCTCCAGTGCCTTTGAAGCTTACAGTGGGAGGGTTTGGGAGTTGGAATATTGTGGGAAGGAAGAAGAAAGAAGATGGAAACTGGTGCATGAGTTTTGTCTCCCTGAGATTATTGGGCCAATGTTTCAAGAGTTGAAAGCCTTGGAGGTTGAATATGTTAGGGGTTGCAGTAGGATTCTGGCTTTTCATCCCTATGTTAAGGACAGTGTGTTTCTTAAGTTTGGTGATAACATCATTTGCTGCAATTTGTTAACTCGTAGGTTTAGGGTTTGCAAATACGGTGGTCTCTCCTTGCTGTTTTATCCGGTGATTCCAGTTCTGCTCCCTTGGTGGCCAACTCCGATTCCTTCGTCACCCTCGTTGGTTGATCCTTCTGTGTAG 1308 0.4694 MAATKSNTTINNLSDDSLTEIFCKLPCKSLFSCKSVSKHWLTLISNTNFHSLYLTHQHTLFHKIQSQGEDPDQPSFILKPYNALVIAPNLPSLQLGSLENHLSLTSLGSDFEPANIVPQLRSVLKFVFACSNGLLVYGNPRPRHKCVYHVRNPLTKDSLKLPSAPTLCDHAGVLVGFMCDPYYSLAKENSGLSIVPTSERRFRVVRIPAFSDTRVTFDVEVFSSETGEWKRFVVSCPQGFACGFFLTSSSVEHEGKLYFMGGGRVLVYDPYDDECVASVIELPRGFGEAYRGCLGVSCGKLQLSEFPISPSSAFEAYSGRVWELEYCGKEEERRWKLVHEFCLPEIIGPMFQELKALEVEYVRGCSRILAFHPYVKDSVFLKFGDNIICCNLLTRRFRVCKYGGLSLLFYPVIPVLLPWWPTPIPSSPSLVDPSV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00525 435 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 13 395 - -
Vimu10g00525 435 SUPERFAMILY Galactose oxidase, central domain 213 276 IPR011043 -
Vimu10g00525 435 Pfam F-box domain 11 50 IPR001810 GO:0005515
Vimu10g00525 435 ProSiteProfiles F-box domain profile. 7 56 IPR001810 GO:0005515
Vimu10g00525 435 SMART fbox_2 13 53 IPR001810 GO:0005515
Vimu10g00525 435 SUPERFAMILY F-box domain 7 72 IPR036047 GO:0005515
Vimu10g00525 435 Gene3D - 6 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00525 - - gmx:102666623 726.472