Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00481 ATGGCACCAAATCATTTCTCAAACTTTGAAGGAACATACAAAAATCTTCGCCTCCCTGCTGCCATAGTTGCTGGTTGTTCTGTGCTTGGAGCTCTAGTGCTGTCTTTCCTTCTCATTCTGCAACATCTTCAATCATACAACAACCCTGCAAGGTTAGGAACAACTTGGACTAACCCGAAACTGGTTTACATTCAGGAGCAGAAGTGGATTGTTGGTGTTATTTCAATGGTCCCTATCTATGCTACTGAGTCTATTATTTCTTTGTGGAATCCAAGATTATCTCTGGCATGTGACATTTTAAGAAACTGCTATGAAGCCTTTGCCTTGTATTCTTTTGGCAGATACCTGATTGCTGCTCTTGGTGGTGAAGGAAAGGTTGTAGAATTACTTGAAGATGAATATGCAGAGCACCTTGGTAAATCCTTGTTAGATGGCCTAGATGAGAATCATGACATGGATGATAGATCATTTTGCAACTTCTTTTGGCATCCAGGCAAGCTAGGAAAAGATCTTCTCACAATAGAAAAATTTGGTCTTGTTCAATATATGATTCTGAAGACTGTTTGTGCATTGTTAGCATTTATATTGGAACAGTTAGGTGTTTATGGTGATGGGGAATTCAAGTGGTACTACGGGTATCCATACATAGCAATAGTAATGAACTTCAGCCAGATGTGGGCGTTATACTGCCTTGTTCAGTTCTATAATGTTACTCATGAGAGACTTCAACCAATACAGCCTCTTGCAAAGTTCATCAGCTTCAAGGCTATTGTGTTTGCTACTTGGTGGCAAGGTGTAGGTATTGCGGTACTGTGTACATTTGGGGTGCTACCCAATGAGGGGAAATTCCAAACTGGTTTGCAAGATTTCTTAATTTGCATAGAGATGGCCGTTGCAGCTGTTGCTCATGTGTTTGTATTTTCTGCAAAACCATATCATTTTCTTCCTTCTGCTGCATATGGAAAAGTCAGAAAAGAAACAAAAGAGGCAGCCTTGGAGATAGATGAGGAGAACAGGCAGAAAGCAGCTTTGCTAAAAGAGACATCGACTCGAGTTGAGTCTCCAAGAACAAGTGTGACGGAGAGCGTCCAGGATATTGTTGTTGAAGGTGGTCAGAGAGTTGTCGAGGATGTTGTACTGGCAATAAATCAAGCAATAGGGCCTGTGGAAAAGGGAGTGACGAGAATTCAGCAAACCTTCCATCACAGAACGGTGGTTTCATCAGATGAGGATGAGGAAAAAGAATCAGATATACAAGTAGAGAGAGATGTCACAGAATCTTAG 1284 0.412 MAPNHFSNFEGTYKNLRLPAAIVAGCSVLGALVLSFLLILQHLQSYNNPARLGTTWTNPKLVYIQEQKWIVGVISMVPIYATESIISLWNPRLSLACDILRNCYEAFALYSFGRYLIAALGGEGKVVELLEDEYAEHLGKSLLDGLDENHDMDDRSFCNFFWHPGKLGKDLLTIEKFGLVQYMILKTVCALLAFILEQLGVYGDGEFKWYYGYPYIAIVMNFSQMWALYCLVQFYNVTHERLQPIQPLAKFISFKAIVFATWWQGVGIAVLCTFGVLPNEGKFQTGLQDFLICIEMAVAAVAHVFVFSAKPYHFLPSAAYGKVRKETKEAALEIDEENRQKAALLKETSTRVESPRTSVTESVQDIVVEGGQRVVEDVVLAINQAIGPVEKGVTRIQQTFHHRTVVSSDEDEEKESDIQVERDVTES 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00481 427 MobiDBLite consensus disorder prediction 404 427 - -
Vimu10g00481 427 SMART Solute_trans_a_2 20 312 IPR005178 -
Vimu10g00481 427 Pfam Organic solute transporter Ostalpha 21 312 IPR005178 -
Vimu10g00481 427 Coils Coil 327 347 - -
Vimu10g00481 427 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 20 415 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00481 Vimu-Chr10 3678814 3682453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00481 - - aprc:113852334 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00481 10 3678814 3682453 Vimu10g00481 10 3678814 3682453 ECH