Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00480 ATGGTAGAGGAATTCTCCAAATCGGTGGAGGAGGGGCTCCGCCTCTCTAAGAGAATATACTTCGGTAAAGACCGCGCCGTCTCGCCGCCCAAACCTCCTCCAACCATGTCCAAGTCCAACACCTCCTACCTCCCCACCGCTCCCATGCTCTACGCCGTCATTCACAATCCTGCTATCGTCGACAACCCCGACGTTCCAAGCTATCAGCCTTACGTCCACGGAAAGTGCGACCCGCCCGCGCTCATTCCTCTTCACATGACCGCCGTTCACCTTCAAGTGCAATGCCATCTCCACGCCGCCGCCTTCATCACCCTCTCCTCCACGTTCCGACTCCACTGCGTCTCCGGCAGCCGCTTCTGCGATTGCATCGTCGCCCTCCCCGTCCCACATCAGGGTTCAATTCTAGGTGTGGAAGTCAGTGTTCATAGGAAGTCTTATTCTACTCTGCTGGTTGATATGAAAGACAAAGGTGGTGAGGAGAATATGATCCAATGTCAAGATGGAGGCTTTATCGGGCCTAATTTGTTTACATTGCATATACCTCAGATAGACGGAGGTTCCAAATTATCTGTTAAATTTAGTTGGTACCAGAAGATACTATACAGCAATGATGAGTTCCTCTTAAATGTGCCGTTTACCTTTCCTGATTTTATCAACCCTGTTGGGAAAATGTCAAAAAAAGAAAAGATAGAAATAACTGTGAATGCTATAGCTGGAAGTGAGCTTCTGTACCATAAAACGAGTCACCCCATGAAGACAGTGAGGAACAATGCTGGGAGTACGGGTTTCTTGTATGAGGCAGATGTTCTCTCGTGGTCAAAAACTGATTTTAGCTTTTCATATGTTATGCCTGATTCTTCAAGTCATATAAGTGGTGGGGTTCTCTTGGAATCTGCACCTGTGGATGACTTTGATCAAAGAGATATGTTCTGCATGTACCTTCATCCAGGAAATCTTCAGAGTAAGAAGATATTCAGAAAGGACATCGTATTTGTAATTGACGTCAGTGGAAGCATGCGGGGAAAGCTAATTGAGGAAACAAAAAATGCACTATCTGTTGCTCTCTCTAAGCTCGATCCTGACGATTCATTTAGTATTATAGCATTTAATGGAGATATATACCAATTTTCAAAATCCATGGAATTGGCTTCAAAGGATGCTGTTGAAAGGGCCATAGAGTGGATTAACATAAACTTTGTTGCAGGGGGTGATACGAATATTTTGCATCCTTTAAACACGGCAATAGAGATGCTATCTGATGCTCAAAGTTCAGTTCCAATTATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATCTGTGATGTGATAAAGAATCATGTTACCAATGGAGAGTCAATGTCCCCACGAATTTATACTTTTGGCATAGATTTGGTCGAGTCTCAAATGCTGCAATTCTTCCACAAAGCTTCATCTATTGTTCTTGCAAATATCACAGCAGACATATTCAATGGTCTGAATGAAGTTGAGGATCTGGTCCACTTGATTCCTTTGGCGTTGACCCCATTCTTATTTCTCTCGGTGTGTCCCTTCCATATTCCAGATCTTTCCTCAGATGGTCCAATGATTTTATCTGGAAGATACAATGGCAGTTTTTCCAAAGATCTTGAAATTAAAGGGGTCTTGGCTGATTTCAGTAATTTTGTAATAGACATGAAGATTGAAGAGGCTAAGGACATACCTCTACAAAGGATTTGTGCAAGGGACCAAATAGAGTATCTTACTGCTCAAGCTTGGCTCTCAAAAGATGAAAAATTAGAACAGCGGGTTGCAAAACTAAGCTTAAAAACGGGCTTTATATCCGAGTACACACTTATGGCAAATCTTGAGAATGATCTTCGAAAGAATGTCAAGGAATCGGATAGAAAGAAAGAAGTGTCAAAAAAGAGCCATCATAAGAAGGCTGGTGCAAAAGAACAAGGGAACCGAATGTTTTTGCTCCCTCGCTTAGGTATAGGATTTGGCAACTTGGCTGCAACTGCTGAAAACATTCAGCCGGGACGTCATGAACCAAAAGGGCCTGATGCGGCTGAAATCTTTGTTAAACGGGCCACGAATTGTTGTAGCTCCTTCTGCAACAATTCCTGCTGTTGCATGTCCTGCATTCATACCTGTACCCGGATAAACAACGAATGTGCAAATGCAATTACTCAACTCTGCGTTGGTTTGGGATGCTTCGGCTGCCTTGAATGTTGTGCAGATATATGCTGTTCTGGAAATGAAAACTGA 2256 0.4326 MVEEFSKSVEEGLRLSKRIYFGKDRAVSPPKPPPTMSKSNTSYLPTAPMLYAVIHNPAIVDNPDVPSYQPYVHGKCDPPALIPLHMTAVHLQVQCHLHAAAFITLSSTFRLHCVSGSRFCDCIVALPVPHQGSILGVEVSVHRKSYSTLLVDMKDKGGEENMIQCQDGGFIGPNLFTLHIPQIDGGSKLSVKFSWYQKILYSNDEFLLNVPFTFPDFINPVGKMSKKEKIEITVNAIAGSELLYHKTSHPMKTVRNNAGSTGFLYEADVLSWSKTDFSFSYVMPDSSSHISGGVLLESAPVDDFDQRDMFCMYLHPGNLQSKKIFRKDIVFVIDVSGSMRGKLIEETKNALSVALSKLDPDDSFSIIAFNGDIYQFSKSMELASKDAVERAIEWININFVAGGDTNILHPLNTAIEMLSDAQSSVPIIFLVTDGTVEDERQICDVIKNHVTNGESMSPRIYTFGIDLVESQMLQFFHKASSIVLANITADIFNGLNEVEDLVHLIPLALTPFLFLSVCPFHIPDLSSDGPMILSGRYNGSFSKDLEIKGVLADFSNFVIDMKIEEAKDIPLQRICARDQIEYLTAQAWLSKDEKLEQRVAKLSLKTGFISEYTLMANLENDLRKNVKESDRKKEVSKKSHHKKAGAKEQGNRMFLLPRLGIGFGNLAATAENIQPGRHEPKGPDAAEIFVKRATNCCSSFCNNSCCCMSCIHTCTRINNECANAITQLCVGLGCFGCLECCADICCSGNEN 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00480 751 Pfam von Willebrand factor type A domain 328 468 IPR002035 -
Vimu10g00480 751 SUPERFAMILY vWA-like 327 474 IPR036465 -
Vimu10g00480 751 Gene3D von Willebrand factor, type A domain 327 490 IPR036465 -
Vimu10g00480 751 MobiDBLite consensus disorder prediction 625 647 - -
Vimu10g00480 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 465 - -
Vimu10g00480 751 SMART VWA_4 326 496 IPR002035 -
Vimu10g00480 751 ProSiteProfiles VWFA domain profile. 328 502 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00480 Vimu-Chr10 3671786 3678241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00480 - - vum:124829313 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00480 10 3671786 3678241 Vimu10g00480 10 3671786 3678241 ECH
Vimu7g01518 7 14346663 14353132 Vimu10g00480 10 3671786 3678241 PCT