Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00476 ATGGCTTCCTTAGTAAGAGTCTGCTCAAGCTTCTTTCTAGCAGTTTTACTGTCTCTCACAGTTCAAATCCTTTTCTTCTCACCCATTGATCCAGTTTTGCTTGATCTAAAACCTTCCACAACAACTGGAGACAACAAATTACAGAACATCATTAAACTTGGAGATGGGCATGTGAAGGAACCAGAAGATCTTTGTGTGGATAAAGAAGGGACTATGTATACTGCTACTCGAGATGGTTGGATCAAACGAATGCTCAGAAATGGAAATTGGGAGAATTGGAAGCATATCGGTGGTGATACCTTGATAGGAGTCACAGAATCTAAAGAAGGTGGTATCATTGTTTGCGACTCTGCCAGGGGTTTGCTGAGGGTTAGAGAAGATGGTATCAGTGTTCTCACTTCACAAGCTAATGATGGTTCTAAAATAAGGTTTGCAGATGATGCAATAGAAGACTGGGATGGGAATGTGTATTTCAGCATTGTGAGTACGAAATTTGATATGCATCATTGGCATCTCGATTTCTTAGAGGCAAGACCTCACGGACAACTTTTCAAGTACACTGCAAAATCCAATGAATCTGTTCTTCTTCTCGATAATCTTGCCTTTGCTAATGGAGTTGCACTATCCAAGGACCAAGATTTTCTTTTGATCTGTGAAACTTGGAGGTGTCTGAGGTATTGGTTAAAAGGAGAAAAGAAAGGCAAAACAGATATTTTCGTAGAAAACCTTCCTGGTGCACCTGATAATATCAATCTTGCTCCTGATGGATCCTTCTGGATCGGTTTGATTCAGTTGAATTCTGAAAGGCTGGAGTTTATGTACAACTACAAGATAACGAAGCATCTGCTAGCTGCATCTCCAAGACTGTTTAACTTTGTGGCTGATCTGAAGAGAAGAGCAAGGGTGGTGAATGTGGGAACAGATGGGAAGATAATTAGGAAGTTTGAAGATGGTGATGGGAAGGTGATTAATTTTGTGACTTCAGCTTTGGAGTTTGAGGAGCATCTTTACTTGGGTAGTCTTAGTTCAAACTTTGTTGGAAAATTACCACTTCATGGTGCATAG 1065 0.4038 MASLVRVCSSFFLAVLLSLTVQILFFSPIDPVLLDLKPSTTTGDNKLQNIIKLGDGHVKEPEDLCVDKEGTMYTATRDGWIKRMLRNGNWENWKHIGGDTLIGVTESKEGGIIVCDSARGLLRVREDGISVLTSQANDGSKIRFADDAIEDWDGNVYFSIVSTKFDMHHWHLDFLEARPHGQLFKYTAKSNESVLLLDNLAFANGVALSKDQDFLLICETWRCLRYWLKGEKKGKTDIFVENLPGAPDNINLAPDGSFWIGLIQLNSERLEFMYNYKITKHLLAASPRLFNFVADLKRRARVVNVGTDGKIIRKFEDGDGKVINFVTSALEFEEHLYLGSLSSNFVGKLPLHGA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00476 354 SUPERFAMILY Calcium-dependent phosphotriesterase 23 351 - -
Vimu10g00476 354 Pfam Strictosidine synthase 149 231 IPR018119 GO:0009058|GO:0016844
Vimu10g00476 354 Gene3D - 44 352 IPR011042 -
Vimu10g00476 354 FunFam ABC transporter permease protein 46 354 - -
Vimu10g00476 354 Pfam Strictosidine synthase-like, N-terminal 45 84 - -
Vimu10g00476 354 PANTHER STRICTOSIDINE SYNTHASE-RELATED 21 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00476 Vimu-Chr10 3646846 3650265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00476 - - gmx:100798788 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00476 10 3646846 3650265 Vimu10g00476 10 3646846 3650265 ECH