Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00473 ATGGGTTCTGAAAGCAAAAGCTTCGACTTTTTCAAGGAGATCGGGTTGGCTTCCTCCAATATCGGTTCTTATGTTAATGGCCAATGGAAAGCCTCTGGTTCCACTGTCACTTCTGTTAACCCTTCTAACAATCAGACCATAGCTGAAGTGACTGAAGCTACTTTGCAAGATTATGAGGAGGGTTTGCAAGCTTGTAGTGAAGCAGCAAAGACATGGATGACGATTCCGGCACCAAAGAGGGGTGAGATTGTGAGACAGATTGGTGAAGCTTTGAGGGCCAAATTGGATCCTCTGGGTAGGCTGGTGTCTCTTGAGATGGGAAAGATTCTTGCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGATTACGCTGTTGGGCTAAGCCGACAATTGAATGGATCAATAATACCATCAGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCCCTAGGAATAGTTGGTGTAATCACCGCTTTCAACTTTCCATGCGCGGTTCTAGGATGGAATGCTTGCATTGCGTTGGTCTGTGGCAACTGTGTTGTGTGGAAGGGTGCTCCAACAACTCCTTTGATAACTATTGCTGTGACAAAGTTAGTAGCTGAAGTTCTTGAGAAGAACAACTTACCCGGTGCAATCTTCACATCTTTCTGTGGAGGTGCTGACATTGGTCAGGCAATAGCAAAAGACACACGCATTCCCCTGGTTTCATTTACTGGAAGTACAAAGGTTGGCTTGATGGTCCAGCAAACAGTGAATGAGAGATTTGGCAAGTGCTTGCTTGAGTTAAGTGGAAACAATGCAATAATAGTCATGGATGATGCAGACATTAAATTGGCCGTTCGTTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGGAGACTGTTTTTGCACGAGAGTATTTACACAAATGTACTAGACCAACTTGTTGGACTCTACAAACAAGTCAAGATAGGGAACCCCTTGGAGAAAGGGACTCTAGTTGGGCCATTGCATACTCGTACTTCGGTGGAAAACTTTCAGAAGGGTATTTCCGGAGGGAAGATCTTAACAGGTGGATCTGTATTAGAGTCAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGGTCCAGTTCTTTATGTCATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTAAGTAGTTCAATCTTTACACAAAGACCTGGAACTATATTCAAATGGATCGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGCAAATATACCTACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGTGACTCATGGAAGCAATACATGCGTCGTTCTACATGTACCATCAACTATGGAAGTGAACTGCCGTTGGCTCAGGGAATTAACTTTGGCTAG 1512 0.4392 MGSESKSFDFFKEIGLASSNIGSYVNGQWKASGSTVTSVNPSNNQTIAEVTEATLQDYEEGLQACSEAAKTWMTIPAPKRGEIVRQIGEALRAKLDPLGRLVSLEMGKILAEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSTKVGLMVQQTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLDQLVGLYKQVKIGNPLEKGTLVGPLHTRTSVENFQKGISGGKILTGGSVLESEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTQRPGTIFKWIGPRGSDCGIVNANIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00473 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 35 480 IPR016162 GO:0016491
Vimu10g00473 503 Pfam Aldehyde dehydrogenase family 32 483 IPR015590 GO:0016491
Vimu10g00473 503 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 4 503 IPR044638 GO:0004029
Vimu10g00473 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 455 IPR016163 GO:0016620
Vimu10g00473 503 SUPERFAMILY ALDH-like 19 492 IPR016161 GO:0016491
Vimu10g00473 503 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 269 455 - -
Vimu10g00473 503 CDD ALDH_F7_AASADH 24 491 - -
Vimu10g00473 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00473 Vimu-Chr10 3624834 3630698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00473 1 503 Acyl Lipid Metabolism Gene Families AT1G54100 79.921 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00473 K14085 - gmx:100811186 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00473 10 3624834 3630698 Vimu10g00473 10 3624834 3630698 ECH