Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00464 ATGGTGGCCATGGCCAGCACTGCCAATAGAAAAATCGAAACATACGAAGAGTTCGCGAAAGTTCACGCGCTTCTACTTGCGGCGTCTGGGTTGCCTGAGTGTCTCCACCGGCGCCTCTTCGAGAAGCTCTCCGGCGAGACATTTGACGGCGGCAACCACTTCCAGATCGAGCCATGCGAGGGCGACCGTCAACGGCGCCTTGTTCTCACGTCGGCGTCGATGGAAGCGGACTCCGAAGTCTTCCTCGTTGATCACGCATGGACTTTCAGACTCTCCGACGCATACAAGCAGCTGCGTGAGGTTCCAGGATTGGCTGAGAGGATGAGTTCTCTGATGTGTGTGGATGTTGATGTGAGTTCAGATGATGGTGAAGATGAAGGAAACGGTGAACTTGGTGTTGAGGAAACTTTGGAGAGGGAAGTTGGTGAGGCAAAGGAGAAAGGAAATGGGACGTTACGGTGGTTGGAGCTTGAAGGGCTTAACATTGATGATGCTATGCTTGTGTCTCTAGCCTTGCCAACTAGGTTTCCGGATTTAGTGGCACTTAGCCTGCTTGGAAACAAGCTCAATAGTGCCGAAGTGGTTGTTCAGGAAGTTATCAAACTTAAGCATCTCAAAGGAATATGGCTCAACAATAACCCAGTTCTTAAAAATTGTGATGGTAAGCTTGCAGGTTTGATTCTTAAGGAGTTGCCTGAACTTGAAATTTATAATTCAAGTTTCACAAGCAATTTTGGGGAGTGGGCGTTGGGCTTTTGTGCAGGGATATACGGAAAGGATAACCCTGGAAATGCTGATCACGCTTCACTGCACACTGTGTCTTCTCTTGACCTTTCAAATAGGAACATTCACAATTTAAAGAATAAGGCATTTACACCCATTTGTTTGCCATCTCTTACGTACTTGAACATTCAAGGAAATCCATTGGAGCAGAACTCAGTTGGTGACTTGTTGAATCTGCTGCAGAGATTCCCTTGCCTGCGTTCATTGGAGGTTGATATTCCAGGTCCACTGGGACGAAGGGCCATTGATATTGTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCGATGCATCTAAAATATTGGAAACAGGAAAGCATGTTATTGATTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCGCTTGCTGATCGTATTATAAATGCAATGTGGCAACATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGACGAAACATCAGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTTTGTTCATGCCAGAGGGCAATCTAGCATCAGCTAATGTTCAGAAAGGTGATGAGTGCACACGCGATTTTCTTCTTGGTATTGGGGAAGATAAGCAACGTTCTGCCAGGCTTACTGCCTGGTTCCACACTCCAGAAGACTACTTTATCCATGCATATGAGAAGCACCGTCAAAAATTGTTGTCCACAAGTTTAATGCCTCCCACCTTTCAGTATTCTGGGACCCAAAGTATTCATCGACACGGTGGGCGTCCATTGCTTGTTTACACAGATATACCTCACGTAGAGGAATACTTGACACATACCGAGTTTGCAATCACAAATGAACCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAGGACATGAAGAAAGCTACCGGAATAACGGATCAGCAATACATTAATCAATTTCCTTTTGAAGCATGTCTTGTTATGAAGCATCATTTGGCAGAGACAATTCAAACGGCACATGGATCTCCCCAATGGTTGCAGCCTACTTATAATCTCGAAACACATCTGTCTCAACTTATTGGTGACTATTGTGTTCGCAAAAGGGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACCATAGATACTACTGTAACTGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAAATTTGCCAGAAGTATATTGAACAGCCTGCATTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCATCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATTGCCAACAACCAATATTCTTTGGCCAGAAGTAGTTTGTTTGAGTATGAAACTCATTTCACTGTTATGAACTATCGCGGAGCCATAAATCATAAGAATGCCAGCGAATTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATGATTCGTTCAGTATTTGAGGCAGCTGCTGTTACTCATCCTGAGATGCACAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTGGACAGCTCTTTCCAACCCAAGTTACTAGAGGTAACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGAGAGGGAGGCGTTGCTAAAGGTTGTGATTTCTTCAATAATGTGTTCAGATGTCTCTTTTTGAATGAAACTTCACATGTGAGTCAATTGTAA 2571 0.4384 MVAMASTANRKIETYEEFAKVHALLLAASGLPECLHRRLFEKLSGETFDGGNHFQIEPCEGDRQRRLVLTSASMEADSEVFLVDHAWTFRLSDAYKQLREVPGLAERMSSLMCVDVDVSSDDGEDEGNGELGVEETLEREVGEAKEKGNGTLRWLELEGLNIDDAMLVSLALPTRFPDLVALSLLGNKLNSAEVVVQEVIKLKHLKGIWLNNNPVLKNCDGKLAGLILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPGNADHASLHTVSSLDLSNRNIHNLKNKAFTPICLPSLTYLNIQGNPLEQNSVGDLLNLLQRFPCLRSLEVDIPGPLGRRAIDIVESLPNISELNGIDASKILETGKHVIDSMLLPRLPEWTPDEPLADRIINAMWQHLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASANVQKGDECTRDFLLGIGEDKQRSARLTAWFHTPEDYFIHAYEKHRQKLLSTSLMPPTFQYSGTQSIHRHGGRPLLVYTDIPHVEEYLTHTEFAITNEPKDADIIWTSVQVDEDMKKATGITDQQYINQFPFEACLVMKHHLAETIQTAHGSPQWLQPTYNLETHLSQLIGDYCVRKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLARSSLFEYETHFTVMNYRGAINHKNASEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVTHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGCDFFNNVFRCLFLNETSHVSQL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00464 856 Gene3D - 650 830 - -
Vimu10g00464 856 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 8 855 IPR027749 -
Vimu10g00464 856 Pfam Tubulin-tyrosine ligase family 574 824 IPR004344 GO:0036211
Vimu10g00464 856 ProSiteProfiles TTL domain profile. 520 848 IPR004344 GO:0036211
Vimu10g00464 856 Gene3D Ribonuclease Inhibitor 253 362 IPR032675 -
Vimu10g00464 856 SUPERFAMILY RNI-like 151 356 - -
Vimu10g00464 856 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 632 813 - -
Vimu10g00464 856 Gene3D Ribonuclease Inhibitor 130 244 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00464 K16609 - gmx:100809212 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00464 10 3517745 3523573 Vimu10g00464 10 3517745 3523573 ECH