Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00460 GGTGCTCAACTTCAAAAACACATCGATGCCACGTTGGGTAGTGGAAACTTGAGGGAAGCAGTTAAACTGCCTCCTGGTGAAGATATCAACGAGTGGCTAGCTGTAAACACTGTTGACTTCTTTAATCAAGTGAATATCCTGTTTGGTACACTTACTGAATTCTGCACAGCAAATAACTGCCCTACAATGTCTGCCGGACCAAAGTATGAGTATAGATGGGCTGATGGTGTTACTATAAAGAAACCAATAGAGGTGTCTGCTCCAAAATATGTTGAGTACTTGATGGATTGGATTGAATCTCAACTAGATGATGAAACAATATTCCCTCAAAGATTGGGGGCTCCCTTTCCTTCTAATTTCCGAGATGTTGTCAAGACAATCTTCAAGCGATTATTCCGTGTATATGCTCACATTTACCATTCTCATTTTCAGAAGATAGTGAGTTTGAAAGAAGAAGCTCACCTTAATACTTGCTTCAAGCACTTTGTTTTGTTTACTTGGGAATTCCGTTTGATAGACAAAGCAGAGTTGGCACCTCTTGAGGACCTTGTTGAATCTATTATTCAGTTATAG 573 0.3979 GAQLQKHIDATLGSGNLREAVKLPPGEDINEWLAVNTVDFFNQVNILFGTLTEFCTANNCPTMSAGPKYEYRWADGVTIKKPIEVSAPKYVEYLMDWIESQLDDETIFPQRLGAPFPSNFRDVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFVLFTWEFRLIDKAELAPLEDLVESIIQL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00460 190 Gene3D MOB kinase activator 1 189 IPR036703 -
Vimu10g00460 190 SMART Mob1_phocein_2 7 180 IPR005301 -
Vimu10g00460 190 Pfam Mob1/phocein family 10 180 IPR005301 -
Vimu10g00460 190 FunFam MOB kinase activator 1A 1 190 - -
Vimu10g00460 190 SUPERFAMILY Mob1/phocein 3 188 IPR036703 -
Vimu10g00460 190 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 2 188 IPR005301 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00460 Vimu-Chr10 3490201 3491637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00460 K06685 - gmx:100794894 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00460 10 3490201 3491637 Vimu10g00460 10 3490201 3491637 ECH