Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00452 ATGGAGGGTGACACATTCTCTGGCCTTGGCAATGGTGCTCAGATTGATGCCAACATCATGCAGACATTTCACAAGAGCTTTGTTCAAGTTCAGAGCATCTTTGATCAGAACAGGCTACTCATCAATGAGATAAACCAGAACCACGAGTCTAAGGTCCCTGATAACCTCACCAGGAATGTGGGTCTCATTAGGGAGCTCAACAACAATATCAGAAGAGTGTATGACCTATATGCTGATCTTTCAAGTTCCTTTACCAAATCCATGGAAGTTACTTCAGAGGGGGATTCCAGTGGTGGTGTGAAATCAGATGGGAAGGCAGGCCACAAGAGACACAGGCCTGTGTAG 345 0.458 MEGDTFSGLGNGAQIDANIMQTFHKSFVQVQSIFDQNRLLINEINQNHESKVPDNLTRNVGLIRELNNNIRRVYDLYADLSSSFTKSMEVTSEGDSSGGVKSDGKAGHKRHRPV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00452 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Vimu10g00452 114 MobiDBLite consensus disorder prediction 87 114 - -
Vimu10g00452 114 PANTHER PROTEIN ELF4-LIKE 4 12 112 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00452 Vimu-Chr10 3383783 3384127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00452 - - ccaj:109810497 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00452 10 3383783 3384127 Vimu10g00452 10 3383783 3384127 ECH
Vimu7g01480 7 14007909 14008253 Vimu10g00452 10 3383783 3384127 PCT