Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00432 TTGTGGTGTGCCACGTTTGAGAACAGAGCAGAACAGAGCAAAACAGAACAGAGCAGAATACTCTTGGTTCTTCTTTTGTCTCTCTCGAAACCACTCTATTATTCTCTCTGCCCCTCTTTAATTCAGTGCCTGTTTACTCTTTTCTTCTTCCTTTTTTATGCAAATATGGGGGAAGAGGTGCGTGTAACCAATTTGCATAATAGAAACGGTGGAAACGAAGATCAGAACCAGGAATTCGACATCTATCCTTTGAGTAGTTACTATTTTGGATCCAAAGATGCCATTCCCTTCAAAGACCACACTCTACATCATCACCTTCTCAGGATCCAATCCAACTATGCTGCCAGTGGATTACGAACTTCTGTGGAGGCTGTCTTACTGGTTGAATTGTTCAAACATCCACACTTGTTGCTTTTGCAAGTAAGAAATTCCATCTATAAACTTCCCGGTGGTAGATTAAGGCCAGGCGAATCAGATACTGATGGATTGAAGCGTAAGCTGACAAGGAAGCTTTCTGTTGATGAAGATGGAGATGGGGATGGTTCAGAATGGGAGGTTGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTATTGTATCCTTTCTTGCCACCAAATGTAAAACAGCCAAAGGAGTGTACAAAAGTGTTCCTTGTGAAGTTGCCTGCCAGTAGGAAGTTCATTGTACCCAAGAACATGAGGTTGCTTGCAGTTCCATTGTGCCAAGTTCATGAAAATCAAAAGACATATGGGCAGATAATATCAGGGGTTCCACAGCTTCTGTCGAAATTCTCTTTCAACATGTTGGAATCTTGA 825 0.4194 MWCATFENRAEQSKTEQSRILLVLLLSLSKPLYYSLCPSLIQCLFTLFFFLFYANMGEEVRVTNLHNRNGGNEDQNQEFDIYPLSSYYFGSKDAIPFKDHTLHHHLLRIQSNYAASGLRTSVEAVLLVELFKHPHLLLLQVRNSIYKLPGGRLRPGESDTDGLKRKLTRKLSVDEDGDGDGSEWEVGECLGMWWRPDFETLLYPFLPPNVKQPKECTKVFLVKLPASRKFIVPKNMRLLAVPLCQVHENQKTYGQIISGVPQLLSKFSFNMLES 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00432 274 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 77 271 - -
Vimu10g00432 274 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 73 273 IPR016706 GO:0003729|GO:0005849|GO:0006378
Vimu10g00432 274 Pfam Nucleotide hydrolase 78 267 IPR016706 GO:0003729|GO:0005849|GO:0006378
Vimu10g00432 274 ProSiteProfiles Nudix hydrolase domain profile. 117 245 IPR000086 -
Vimu10g00432 274 FunFam Pre-mRNA cleavage factor Im subunit 2 77 271 - -
Vimu10g00432 274 SUPERFAMILY Nudix 125 178 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00432 Vimu-Chr10 3239797 3241596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00432 K14397 - gmx:100791216 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00432 10 3239797 3241596 Vimu10g00432 10 3239797 3241596 ECH