Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00428 ATGACTGAGAATCAGTTAGAGGAGCAGGGGTTGGAGGTGGCACAGTGGAGGTCGGGAGTTACTAATGGAATCGTTGGAGCTGGAAAATCAGATGGCGTCTCTCAACAGACAGGGTTGGGCATACGCGTCTCTACGCCAAGAAGCGACCTAGAAAATAATTCTCCTGTCAATGATAGACGGGATCGTCCTGTCAGTTCAGACAAGGAAAGGGTGAATTTCAGAGCTGTTAACAAGGCAACTGTTCGTGATGAATTCAATTCGGCAAGCCCTAATTCAAGTGCAAAAATGAATACACCTATTCGGGCACCACGATCTGGTTCAGGAGTAGCTCCAAAGTCATCACCAGGTGTCGTTAGAGCAGCTGTCCCTAATGATTGGGAGCCATCACATTGTATGACCAAGCCCCCTACCAGTGTTGGCACCAACAATCGCAAGCGAATGGCGTCAGCACGATCATCTTCCCCACCTGTTGTCCACTGGCAGAGGCCACAGAAGAGCTCCCGTACGGCTAGGAGAGCAAATTTTGTGTCCACTGTGTCAAGTATTGATGATTCCCCTGCTTTGGATTCTGTGTCAGATGTGTCTGGTAATGATCTTGGGTTGGGATTTGTTAGACGTTTGGCTGGTAATTCTCCTCAGCAAATTAAATTAAAAGGTGATTCTTTAACTTCAGCCGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGAGATAAAACCAAAAGAGAAGGGCACGAAATCAGCGGAGATAGATCAGAAACCTGGACAAAATGTTCAAAAGGTTTCTAACTTCATCCTTCCCTCAAGAAAAAGTAAGCTTGTTTCTGCAGAAGAACATGGAGATGGTGTTAGGAGGCAAGGTAGGACAGGACGCAATTTTCCTGTTGCAAGGTCGCCAACACCAACGACATCTGAGAAGCTTGGAAATGTAGGAACTGTAAAGCAACTTAGAAGTTCAAGACTAGGACTTGAGAAGAGTGAAAGGGCAGGCCGTCCACCAACCCGGAAACTTTCTGATCGTAAGGCATATGCTCGTCAGAAACATACTGCACTTAGTTCATCAGCAGATTTTCTTGTTGGGTCGGGAGATGGACATGAAGAATTACTGGCTGCTGTAAAGGGTGTTATCAACTCTGCTCGTTCTTTTTCCAGCCAATTCTGGAGGCAGATGGAGCTTTTCTTTGGTTTAATAACTGAGGAGGATATTGCTTACTGGAAGCAGAAGATAAATCATGAATCAAGTGGATTGATGCCAACTCCAGTTCGTTCATATGTAAATGGTTGTGAAACTGTTGCTAATGGGTTTGGGTTAATGGGCCATGGAAGAGACTTTGAACCTTGTAATCAAATGGGTGCTGGAGTTGTAGCAGAACAGTTACATCTAGCTAAAGGAGATTGCAATGGAATTCCCCTCTGTCAAAGGCTTATATCTGCTTTAATTTCAGAGGAGTGTAGCAGTGAAAGTGAAGATATAAAGTTTGATGCATCTGATGCTGAATTTGAGGCTGATGGAGAGTTGGATTTGAGTAGTTTGGATGACAGTTCTCGATCTAATTCTTATCTTGCTTGTTATTCTGCTTACAATGGTTATAGGATAACTAGAACATCAGGACACGATGAGACTGAAAGTGATAAAGTTGATATCCCATCAACTGGGTTGAATTCAAGCCAGAACATGCCTACTGTGACCTGTTCAGAGTTGCAATATGCCACCTTGGGTATGAATGAAAAGCTTCTTTTGGAGCTTCAAAGTATTGGAATTTCACCAGAATCAGTGCCTGAAATGTTGCAAGCAAATGATGAAGGAATTTGTGAGAATATCACCAGGTTAGAGGAGCATTACCAAGGACAGATGTCCAAGAGGAACTGCCTACTGGATGGATTATTACGATCTGCATCAGTGACAAAAGAAGTTCAAGAAAAGGATTTTGAACAAAATGCTCTTGACAAACTCCTCATGATGGCTTATGAGAAATACATGGCTTGTCGAGGTCCTAGCTCATCAGGTGGGAAGAATGCAGGCAACAAAATGGCCAAGCAAACTGCATTGGGATTTGTTAAACGAACGTTGGAACGATGTCAACAATTTGAAGATACAGGCAAGAGCTGCTTCAGCGAGCCTTTGTATAAGGATATGTTCCTCGCTGCTTCCTCCCAGCTAAGTATTGTTCGAGAATTAGATGGCATGGAGGCTGAGTCCCCTGAAATATTATATTTAATTCTTGTTTTTCTATCTGCAGGTTCCATGGGTTCACAGCAGAACCCTTCACAATTTAGTCAGAATGTGAAAGATCATGATTTCAATTCATCAGATATTCGTCATGCTGTAAATGGTTCCTCTGAACAGGCTAGTGAGAAGGAAGGTCTTTGGTCAAACAGGGTGAAGAAAAGGGAATTGTCCCTTGATGATGTTGGCAGTACCATTGGGAGTTCAAGTGCTCCATCAGGCATTGGGGGTTCTCTATCAAATAGTACAAAAGGAAAGAGAAGTGAGAGAGACAGGGACGGAAAAGGGTATAGCAGAGAAGTGCCATCCAGAAATGGTACTACTAAAGTTGGTAGGCCAGCATTATCTAGTGCTAAGGGAGAAAGGAAACCAAAATCAAAGCCTAAGCAGAAAGCAACTAAGCATTCTGTTTCTGTAAATGGCCTCCTCGGCAAGCTATCAGAGCAACCTAAGTCAAAGTCTAATGAAATGTCTAATAATATGAAGAGCAAGGAGAAAGATGAGTTTAGCATTGGTGAATATGATGACCATGAGCCTATTGATTTGTCCAACCTTCAATTACCTGGAATGGATGTACTTGGTGTTCCTGATGATCTCGGTGACCAAGGTCAGGATATTGGTTCATGGTTGAATATCGATGATGATGGATTGCAAGATCAGGATTTTATGGGGCTTGAAATTCCCATGGATGATCTTTCAGACTTGAATATGATGGTTTGA 2946 0.4308 MTENQLEEQGLEVAQWRSGVTNGIVGAGKSDGVSQQTGLGIRVSTPRSDLENNSPVNDRRDRPVSSDKERVNFRAVNKATVRDEFNSASPNSSAKMNTPIRAPRSGSGVAPKSSPGVVRAAVPNDWEPSHCMTKPPTSVGTNNRKRMASARSSSPPVVHWQRPQKSSRTARRANFVSTVSSIDDSPALDSVSDVSGNDLGLGFVRRLAGNSPQQIKLKGDSLTSAALSESEESGVAEIKPKEKGTKSAEIDQKPGQNVQKVSNFILPSRKSKLVSAEEHGDGVRRQGRTGRNFPVARSPTPTTSEKLGNVGTVKQLRSSRLGLEKSERAGRPPTRKLSDRKAYARQKHTALSSSADFLVGSGDGHEELLAAVKGVINSARSFSSQFWRQMELFFGLITEEDIAYWKQKINHESSGLMPTPVRSYVNGCETVANGFGLMGHGRDFEPCNQMGAGVVAEQLHLAKGDCNGIPLCQRLISALISEECSSESEDIKFDASDAEFEADGELDLSSLDDSSRSNSYLACYSAYNGYRITRTSGHDETESDKVDIPSTGLNSSQNMPTVTCSELQYATLGMNEKLLLELQSIGISPESVPEMLQANDEGICENITRLEEHYQGQMSKRNCLLDGLLRSASVTKEVQEKDFEQNALDKLLMMAYEKYMACRGPSSSGGKNAGNKMAKQTALGFVKRTLERCQQFEDTGKSCFSEPLYKDMFLAASSQLSIVRELDGMEAESPEILYLILVFLSAGSMGSQQNPSQFSQNVKDHDFNSSDIRHAVNGSSEQASEKEGLWSNRVKKRELSLDDVGSTIGSSSAPSGIGGSLSNSTKGKRSERDRDGKGYSREVPSRNGTTKVGRPALSSAKGERKPKSKPKQKATKHSVSVNGLLGKLSEQPKSKSNEMSNNMKSKEKDEFSIGEYDDHEPIDLSNLQLPGMDVLGVPDDLGDQGQDIGSWLNIDDDGLQDQDFMGLEIPMDDLSDLNMMV 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00428 981 MobiDBLite consensus disorder prediction 22 172 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 875 899 - -
Vimu10g00428 981 PANTHER OS05G0107300 PROTEIN 13 981 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 772 787 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 225 256 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 770 791 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 293 307 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 320 341 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 234 249 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 28 52 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 535 557 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 82 100 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 272 286 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 804 825 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 319 341 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 134 172 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 53 77 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 826 841 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 804 909 - -
Vimu10g00428 981 MobiDBLite consensus disorder prediction 271 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00428 Vimu-Chr10 3211727 3219230 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00428 - - gmx:100812435 1524.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00428 10 3211727 3219230 Vimu10g00428 10 3211727 3219230 ECH
Vimu7g01458 7 13858908 13859621 Vimu10g00428 10 3211727 3219230 PCT