Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00414 ATGGACCTATCTACTCTCACAACACCCTTTGGCATAAATCCTTTTACGATGTCCACAACTGTGAAGACAAGAAGAATGTGGTACATTCTAATGGCTTCAATTCTACTCACACACTTGGTCGGCGTAAAAAGCAAGCCTTTGTTTCTGTTTGATGCTTCAACTCAACAAGCAACCTTCAAGCAGTCTTCCACAGTAGCTGATGAGCAAACAAGAATTCAAGGCGTATCAAAACATGCTTTTGACTCTACACAGGGGAATGAAAGAAAAAGTATGTTGAAATCAAAGGAAAAAGGGTACAAAGAAGCATTGAGGGGACTGAGCAGATTAGGGTCAACACCACCAAGGTGTGAGCACAAGTGTGCAGGCTGTATTCCCTGTGATCCTATTCAAATTCCTACCAACAATGATCTTCTGGGTACTCAGTATGCCAATTACGAGCCTGAAGGATGGAAGTGCAAATGTGGCAATGCTTATTTCAATCCATGA 486 0.4198 MDLSTLTTPFGINPFTMSTTVKTRRMWYILMASILLTHLVGVKSKPLFLFDASTQQATFKQSSTVADEQTRIQGVSKHAFDSTQGNERKSMLKSKEKGYKEALRGLSRLGSTPPRCEHKCAGCIPCDPIQIPTNNDLLGTQYANYEPEGWKCKCGNAYFNP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00414 161 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 58 161 IPR039455 GO:0010374
Vimu10g00414 161 Pfam Epidermal patterning factor proteins 108 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00414 Vimu-Chr10 3124062 3125186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00414 - - vra:106760068 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00414 10 3124062 3125186 Vimu10g00414 10 3124062 3125186 ECH