Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00402 ATGGCCGAGAAACCCCAACCGGTTCGGGTGCTGTACTGTGGGGTGTGCAGTTTGCCTCCCGAATACTGCGAATTTGGATCCGATTTCGAAAAATGCAAACCCTGGTTGATCCAAAACGTCCCTGACCTATACCCTAATCTTCTTAAAGAGGCAAATGATAAGGGAGCTGATAAAGTTGCTGACAAGCTGCAAAGTACCGGTATATCGTCAGGAGCTGGTGATGGAGCTGCTTCCTCAGCACCGAAGCAAGAAGAAGTGAAGCGTCTTCCGGGTGGGAAGATAAAGAAGAAGGATAAGCAAGAGGTGGTTATTGAAAAGGTTGTACGTAACAAGCGAAAGTGTATCACCACTGTGAAGGGCCTGGAGCTTTTCGGTGTCAAGCTCAGCGATGCTTCCAAGAAACTCGGGAAAAAGTTTGCTACAGGAGCCTCTGTTGTCAAGCTGTGTTATTGGGGAATTGTGTCATTGAGCGGTAAAAGTGGAATATTGTTGCAATTTGGAGTAGCTGCTGCTGCAGCAGCAATAGGACCAACTGAGAAAGAACAAATTGATGTTCAAGGGGATATAGCTTATGACATCGTGGAATTTATTACAGATACATGGCCTGATAAGATGGGAGAAAGGTTCCAGCTGCTTGATTTTAATATCCTGGCGTTAAAACTTCCTACTGGTTGCTAG 678 0.4572 MAEKPQPVRVLYCGVCSLPPEYCEFGSDFEKCKPWLIQNVPDLYPNLLKEANDKGADKVADKLQSTGISSGAGDGAASSAPKQEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKLCYWGIVSLSGKSGILLQFGVAAAAAAIGPTEKEQIDVQGDIAYDIVEFITDTWPDKMGERFQLLDFNILALKLPTGC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00402 225 Pfam Translation initiation factor SUI1 99 200 IPR001950 GO:0003743|GO:0006413
Vimu10g00402 225 CDD DENR_C 100 203 IPR046447 -
Vimu10g00402 225 Gene3D - 77 206 - -
Vimu10g00402 225 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 170 203 - -
Vimu10g00402 225 MobiDBLite consensus disorder prediction 69 89 - -
Vimu10g00402 225 NCBIfam density-regulated protein DRP1 7 147 IPR005873 GO:0003743
Vimu10g00402 225 SUPERFAMILY eIF1-like 19 148 IPR036877 GO:0003743|GO:0006413
Vimu10g00402 225 ProSiteProfiles Translation initiation factor SUI1 family profile. 102 201 IPR001950 GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00402 K24272 - gmx:100306708 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00402 10 3003735 3006568 Vimu10g00402 10 3003735 3006568 ECH