Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00401 ATGAGTGAAACAGCAGCAAGAGATTCTTCAGTTTATGGTGCCATGGCAAGTTGGTTCACACCCTCCTATCTCTTCATCTTCATCAACCTTGTCATTGGAACCATAGCCATCACCTCTCGTTTCACCACCACACCAAAACGCCAACGCCAACACCAACACCAACTCATCCGTTCTCCCTCTTTGCTTGACAGATTCACATCCTTCAACTTACGTTATCACAAACATCAAACCACAGCAACGTTAACGCCTCACGACGTTGTTGTGGAGTCTGTCCAGACTCTAGACTCGCCTCGGCATGTTCAAATCGGTTCCTTCGATACGACTGATGAGACCCGAGAAGGTGATGAAGTTAAAAGTGATAACTCACCCCAGCTGGACCGGCTTCCGTCTTCGTCGTTGTTGGACCGGATTAGGTCATTTAGTTTTCGTAGAACAGAAAGTGAAAGATCCGAGCCGGTCCAAAATTCTGACTCTGGAATGAATCTGGTACGAAGTCCATCTTTGTTGGAGCGCGTTAGGCGTTTTAGTCTGGATTTAGGTAAAGTGGAGAAGGAAAGTTGTGACTCGGTTCAGCAGCAATTAAGCCGTGCTCCTTCCTTCCTGCAGCGGCTTAAGTCCTTGACCTTTGACAGATCGGAGTCCGCAGCTGAGGTGAGGGATGGTGGGGAGTTCGTGGAAGAAAGGGAAGAAGAGGAAGGGGTGGACGCCAAGGCTGATGATTTCATCAACAGGTTTAGGCAGCAACTCAGGTTGCAGAGGCTTGACTCTATTCTACGATGCAGGGATATGCTCACACGAAACTCATAA 807 0.4833 MSETAARDSSVYGAMASWFTPSYLFIFINLVIGTIAITSRFTTTPKRQRQHQHQLIRSPSLLDRFTSFNLRYHKHQTTATLTPHDVVVESVQTLDSPRHVQIGSFDTTDETREGDEVKSDNSPQLDRLPSSSLLDRIRSFSFRRTESERSEPVQNSDSGMNLVRSPSLLERVRRFSLDLGKVEKESCDSVQQQLSRAPSFLQRLKSLTFDRSESAAEVRDGGEFVEEREEEEGVDAKADDFINRFRQQLRLQRLDSILRCRDMLTRNS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00401 268 Pfam Domain of unknown function (DUF4408) 10 41 IPR025520 -
Vimu10g00401 268 MobiDBLite consensus disorder prediction 105 122 - -
Vimu10g00401 268 MobiDBLite consensus disorder prediction 99 129 - -
Vimu10g00401 268 Pfam Cotton fibre expressed protein 232 266 IPR008480 -
Vimu10g00401 268 PANTHER COTTON FIBER (DUF761) 8 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00401 Vimu-Chr10 3001307 3002113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00401 - - vra:106761585 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01431 7 13617094 13618207 Vimu10g00401 10 3001307 3002113 PCT