Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00382 ATGATCAAAGGAAAAGACGTGTACGATGTTGTGGCAGCGCTTGTGCCTCTCTACGTGGCTTTGTTCTTAGCATATGGTTCCGTCCGTTGGTGGAAGATCTTCAGCCCAGAACAGTGTTCTGGCATAAACCGTTTTGTGTCTGTTTTTGCAGTGCCCTTCCTCTCTTTCCATTTCATATCCAACAATAACCCTTACACCATGAACTTCAGGTTCTTAGCAGCGGACTGTCTTCAAAAGGTTGTGATTTTGGCTGCACTTTTTCTGTGGAACACTTTCACAAAGTGGGGTAGCATTGACTGGACCATCACACTGTTCTCACTCTCCACTCTCCCCAACACACTCATCATGGGTGTTCCTCTTCTCAAAGCCATGTACGGAGATTTCACAGCCACCCTCATGATTCAAATTGTGGTTTTTCAGAGTGTGATTTGGTACACTCTCTTGCTGTTCATGTTTGAATACAGAGGGGCCAAGCTACTCATCTCAGAGCAATTCCCTGACACTGCTGGAGCCATTGCCTCCCTAAGGGTTGATTCAAGTGTGAGCTCTCTCAATGGAAGAGAGCCATTGCATGCTGATGCAGAAATTGGAGAAAACGGAGAACTCCACGTGGTGTTGAGAAGCATGTCACGTTCTACGTCCATAAGCATACCTTCTTCATTCCACAAGTCATATTCAACACCTAGACCATCAAATGCAGCTTTTGTGGATATGCCTCAGAACATGTTTTGGAGGAGCAAGAGTGACGGTTGCGGGGTTTCTAGAGGTGGTTTTGTTTACTCATACCCCTCACAAAATCTAGGGTTTGTAGGGTTTGATGGTGGTTTTGTTTCTTCACACATTTATCCAAAACCAGAGTTTCCAGGGTTTGTTAGTGGTTTGGCTACTCCATACCCGTCTCCAAAACCAGTGATTGCATGGTCGGATGGTGGTGGCCAAAGAAAAGCAGGTTCTAAAAATTGTTCATACATGTTTGGTTGCAGCTTGAATGCATCATCAAATTCTGATGTTAATCAGAGACATGAAATAAACAGAGTTGGCTCCTTTGCCGCCATTGGACCTTCCAAATTTCCACTCGAAACTGTTGCTTCAAAAGAACATGAACTTGTAAGTGAAGAAGTAGCAGAACATCGTGCAATGGGGAAACAAAAAGAGGTGAAAAATGAAGAAGTTGAGACAAACAAAAATCAACAAATGCCACGTGCTAATGTCATGTTAAAACTTATTCTGATAATGGTTTGGAGGAATCTGATAAGAAACCCTAATACGTATGCAAGTGTTTTAGGTCTAATTTGGTCTCTGATATTTTACAGGTGGAGCATCAAAGTGCCATCTATTATAAAAGGTTCCACTGAAATAATTTCTAACACAGGACTAGGAATGGCCATGTTCAGTCTTGGTCTATTCATGGCATTACAACCTAAGATCATTACTTGTGGAAAAACTATGGCTGCACTTGCCTTCGCAATTAAGTTCTTGGTTGGTCCATTTATGATTCTTGCAGCCTCCAAAATAATTGGTATCCATGGAGTTCTTTTACGAGTTACAATTGTTCAGGCTGCTCTTCCCCAAGGAATTGTCCCATTTGTATTTGCAAAGGAATATAATCTTCATGCAGACGTACTCAGCACAGCAGTTGTCTTCGGAATGGTGGTTGCGTTGCCTGTAACAATAATTTACTATGTAGTTCTTGGACTTTAG 1701 0.4227 MIKGKDVYDVVAALVPLYVALFLAYGSVRWWKIFSPEQCSGINRFVSVFAVPFLSFHFISNNNPYTMNFRFLAADCLQKVVILAALFLWNTFTKWGSIDWTITLFSLSTLPNTLIMGVPLLKAMYGDFTATLMIQIVVFQSVIWYTLLLFMFEYRGAKLLISEQFPDTAGAIASLRVDSSVSSLNGREPLHADAEIGENGELHVVLRSMSRSTSISIPSSFHKSYSTPRPSNAAFVDMPQNMFWRSKSDGCGVSRGGFVYSYPSQNLGFVGFDGGFVSSHIYPKPEFPGFVSGLATPYPSPKPVIAWSDGGGQRKAGSKNCSYMFGCSLNASSNSDVNQRHEINRVGSFAAIGPSKFPLETVASKEHELVSEEVAEHRAMGKQKEVKNEEVETNKNQQMPRANVMLKLILIMVWRNLIRNPNTYASVLGLIWSLIFYRWSIKVPSIIKGSTEIISNTGLGMAMFSLGLFMALQPKIITCGKTMAALAFAIKFLVGPFMILAASKIIGIHGVLLRVTIVQAALPQGIVPFVFAKEYNLHADVLSTAVVFGMVVALPVTIIYYVVLGL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00382 566 Pfam Membrane transport protein 10 561 IPR004776 GO:0016020|GO:0055085
Vimu10g00382 566 MobiDBLite consensus disorder prediction 376 395 - -
Vimu10g00382 566 MobiDBLite consensus disorder prediction 376 394 - -
Vimu10g00382 566 NCBIfam auxin efflux carrier 1 566 IPR014024 -
Vimu10g00382 566 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00382 Vimu-Chr10 2795685 2800801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00382 1 566 Organic Solute Cotransporters AT1G70940 45.455 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00382 K13947 - gmx:100788935 660.988