Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00380 ATGATCAAAGGTAGCGACGTGTATGATGTAGTGGCAGCCATTGTGCCCCTCTACGTGGCTTTGATCTTAGCATATGGCTCCGTCCGGTGGTGGAAGATCTTCAGCCCAGAACAGTGCTCTGGCATAAACCGTTTTGTGTCTGTTTTTGCGGTGCCCTTCCTCTGTTTTCGTTTCATATCCAACAATGACCCTTACACCATGAACTTCAGGTTCTTAGCTGCGGACTCTCTTCAAAAGGTTGTGATTTTGGTTGCACTTGTTCTGTGGAACGCTTTCACAAAGTGGGGTAGCCTTGACTGGACCATCACACTGTTCTCACTCTCCACTCTCCCCAACACGCTCATCATGGGGGTTCCTCTTCTGAAAGCCATGTACGGAGATTTCACAGGCACCCTCATGATCCAAATTGTGGTTTTTCAGAGTGTTATTTGGTACACTCTCTTGCTGTTCATGTTTGAATATAGAGCGGCTAAGCTACTCATTATGGAGAATTTCCCTGATACAGCAGGTTCTATATCCTCCTTTCGAGTTGATTCACATGTTGGTTCTCTGGGTGGTCGAGAGATGCTAGAAACCAATGCAGAAACCGGAGAAGATGGGAATGTTCACGTGGTGGTGAGGAGCATGTCACGTTCTGTGTCCGTTGCATCATACCTCACTGGGATTGAGATCTATTCAGAGGAGTCGTCTAGAGAACCAAAGCTGGGAAGATCAAATTTTAGTGCCACAGATTTGCATCCACATGGTCTGAAAAGAGAGAGGATGTCGAAAATTCATGACAAGAGTTTCTCGAGGAGCAAGAGCGTTGGTCATAATTTGGTTTCTCCGTATCCTTTTCTGAAACCAACAGGGGACAAGGAGACAGACATTAATAAGGGTTTGCACATGTTTATGTCAAGTTCACCAACTTCTGATCCTAATGTGAGACATGCTGCGAATAATAGAGTTGGATCTTACGAGTTTGAGACCATGGAATCTTCAAACGGTGTTGATTTTGCAAGCCAAACTGGTCCATCCAAAGATGTTGAAAATAAAGGTGTCGAAGATCCTGTATTGAAGAATCAGATGAACAGCAATAGTGAAGGAGATTCAAACAGAAGGAAAGAAATGCCTCGTGCCAGTGTCATGATAAAGCTTATTCTCACCATGGTTTTGAGGAATCTCATAAGAAACCCTAATACCTATGCAAGTGTTTCGGGTCTTGTTTGGTCTCTCATATTTTTTAGGTGGAACATGAAGATGCCATCTATAATAAAAGGTTCCATAGACATAATATCTAATGCTGGGTTGGGAATGGCCATGTTCAGTTTAGGTCTGTTCATGGGATTACAACCGAAAATCATTACTTGTGGGAAAACCCGAGCTATGATTTCAATGTTAGTTAAGTTCTTGGTTGGTCCAATGGTGATTCTTGCAACCTCCAAAGCCATGGATATCAATGGAGTTCTTCTAAAAGTTGCAGTGATCCAGGCTTCTCTTCCAGAGGGTCTTGTTCCCTTTATATTTGCCAAAGAATATAATCTCCATGCAGACATACTCAGCACAGCGGTTATCTTTGGAATGGTGATTGCTTTCCCAGTAACAATAGTATACTACGTGATTCTTGGACTCTAA 1614 0.4306 MIKGSDVYDVVAAIVPLYVALILAYGSVRWWKIFSPEQCSGINRFVSVFAVPFLCFRFISNNDPYTMNFRFLAADSLQKVVILVALVLWNAFTKWGSLDWTITLFSLSTLPNTLIMGVPLLKAMYGDFTGTLMIQIVVFQSVIWYTLLLFMFEYRAAKLLIMENFPDTAGSISSFRVDSHVGSLGGREMLETNAETGEDGNVHVVVRSMSRSVSVASYLTGIEIYSEESSREPKLGRSNFSATDLHPHGLKRERMSKIHDKSFSRSKSVGHNLVSPYPFLKPTGDKETDINKGLHMFMSSSPTSDPNVRHAANNRVGSYEFETMESSNGVDFASQTGPSKDVENKGVEDPVLKNQMNSNSEGDSNRRKEMPRASVMIKLILTMVLRNLIRNPNTYASVSGLVWSLIFFRWNMKMPSIIKGSIDIISNAGLGMAMFSLGLFMGLQPKIITCGKTRAMISMLVKFLVGPMVILATSKAMDINGVLLKVAVIQASLPEGLVPFIFAKEYNLHADILSTAVIFGMVIAFPVTIVYYVILGL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00380 537 MobiDBLite consensus disorder prediction 327 341 - -
Vimu10g00380 537 NCBIfam auxin efflux carrier 1 537 IPR014024 -
Vimu10g00380 537 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 537 - -
Vimu10g00380 537 MobiDBLite consensus disorder prediction 327 369 - -
Vimu10g00380 537 Pfam Membrane transport protein 10 532 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00380 Vimu-Chr10 2785025 2794164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00380 1 537 Organic Solute Cotransporters AT1G23080 47.002 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00380 K13947 - gmx:100788935 626.32