Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00360 ATGGCACACCAGGCAACGGCACTCGAAACACTGAAAGGAAAGAATCTAATCGAAAAGGTATGCACACTCTCCGCAACAAGAAACCTGTGTGTTCAGGTTCTCTCTTCAGACCCTCTCAGAAGCCCTAACGCAGACCTCAAAGACTTGGCAATCATTTCTCTCAGGGTTGCTGCCACCAACGCTTCTGGGATCCTCGGCGAAGCCAAAATGCTCATCGACGACGATAGCCTCAGCCCCGATGTCCAACAAGGTTTGGCCGATTGCAAGGAGACAATTCTCGACGCAGAGAGCCAGTTGGAGGACACCATTGCCGCTCTCTTGATCGATGCCAAATCTGATACTCAGATTTGGCTCAAAGCTGCCTTGGCCGCAATCGACACCTGCGACGCCTCCATCCCCGGCGACGACGACATTCTCTCCGTTCAGAGCGTCATCTTCCGCAAGCTCTGCAACATTGCCATCACCGTCAGCAGGCTCCTTCTTCATCCCGTCAAACTCTAA 501 0.5289 MAHQATALETLKGKNLIEKVCTLSATRNLCVQVLSSDPLRSPNADLKDLAIISLRVAATNASGILGEAKMLIDDDSLSPDVQQGLADCKETILDAESQLEDTIAALLIDAKSDTQIWLKAALAAIDTCDASIPGDDDILSVQSVIFRKLCNIAITVSRLLLHPVKL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00360 166 Pfam Plant invertase/pectin methylesterase inhibitor 15 154 IPR006501 GO:0004857
Vimu10g00360 166 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 153 - -
Vimu10g00360 166 NCBIfam pectinesterase inhibitor domain 5 158 IPR006501 GO:0004857
Vimu10g00360 166 Gene3D Invertase/pectin methylesterase inhibitor family protein 12 161 IPR035513 -
Vimu10g00360 166 SMART PMEI_2 12 156 IPR006501 GO:0004857
Vimu10g00360 166 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 14 161 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00360 Vimu-Chr10 2550953 2551453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00360 - - vun:114164758 256.914