Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00352 ATGGATTCGGACACTGATTCACCAAAATCCAAAACTCCCAGAAAGGAGAAGAACAAGAAAAACAAGAAGAAAAAAGATGTCCCCCCTCAACCTGATCGAATTGAGGTTGCGGTAGAGGTTGTCCGCGAGCACCCCAATAAAACAGCTCCTGTTGTTGGTTATTTTCCTTCGGGCTTTGATCCGGTTAAGAATCATGCCAGTGGTTCTGGTCCCTCTGAATTTCAACTTTACAGGCACAGGAACATGTCCAAGAGGATGCAGCTTGTTGTTCGCCCTCCTGGATCTTCGGTGGAATTTGTTGGAACTAGTTTTTCTGGAGAGGCTGCGGCTGGACACCGGGCCATGTTCGCGCTCGGACTCCTTGATAAGGAAGCTGGGACCCTGAAGATTGTTCCCATTGCTGGTAATAAGATATTCAGATTGGAGCCAAAGGTTAAAGGTGTGGACGCTGCTGACAATGAGCCTGCGAGCTCAACATTGGAAGAGATGACTCCACAGCAGAAGTTTGCGGAGACTACTGCTATATTGGGAACAAAGAAGGATATTGAGAAGGCTAAAAAGAAGCTAGCTCTCAAACAAGATGAAGATCCTAATTCTCAAAGGAATCTGAATGTGAAAATGAAAAATGTTTCTGTAAAAGAAAGCGCTCTTCAAAGTACAGAATCTCATGTTTCTCGCAACATACCACCATATGATACTTCTGCAACTACACCTCAGGAGGCATATGTATTGGACAAAATCATTCTTACAGGAGAATGGAATTATCTTGAAGACATTTATTATAATTTGCATCAGGAAGAAAAAGCGGACTTCAGTTCTTATCCAACATTTGTTCGCAACAGGGTAGAGGGATTAAGGAAAATTAAGGATGAGTCAGAAAAGAGGAAGCTTTCCTGCATATTCTCATACATCAATCATCTGATAAAGTTCAAAGATCAGCATTCCTTTGGTGTTTTCTCCGCAAAGGGCCATAAAATCCCCAACATCCTGCGACATAAATTTTCAAATATGTTTGCTGTTTCTGAACTTAGAAGGCTACCCCCTGAAAAAATTTCTCTTCTCATAAGTTATGTGCTGGTGCTTACGCTTTTCGCTGATAACTTCCAAACTGACTGCACAGATATTGCAAAGGATCTGAGCATGAGTGTTTTGGCCGTGAGAAAAGTCTATGCGGAATTGGGTTGCAAATTAGTCCGTCAGAAAGGCACTTTTAACAGTTTGTCTGTTACGCTTGCTGTCCCTCTTAAATTTCCCGACTTAAAAAAGCCAGGAAAGAGGAAGAGGTAG 1287 0.4235 MDSDTDSPKSKTPRKEKNKKNKKKKDVPPQPDRIEVAVEVVREHPNKTAPVVGYFPSGFDPVKNHASGSGPSEFQLYRHRNMSKRMQLVVRPPGSSVEFVGTSFSGEAAAGHRAMFALGLLDKEAGTLKIVPIAGNKIFRLEPKVKGVDAADNEPASSTLEEMTPQQKFAETTAILGTKKDIEKAKKKLALKQDEDPNSQRNLNVKMKNVSVKESALQSTESHVSRNIPPYDTSATTPQEAYVLDKIILTGEWNYLEDIYYNLHQEEKADFSSYPTFVRNRVEGLRKIKDESEKRKLSCIFSYINHLIKFKDQHSFGVFSAKGHKIPNILRHKFSNMFAVSELRRLPPEKISLLISYVLVLTLFADNFQTDCTDIAKDLSMSVLAVRKVYAELGCKLVRQKGTFNSLSVTLAVPLKFPDLKKPGKRKR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00352 428 Coils Coil 175 195 - -
Vimu10g00352 428 MobiDBLite consensus disorder prediction 1 33 - -
Vimu10g00352 428 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 38 427 IPR009668 GO:0003677|GO:0006351
Vimu10g00352 428 Pfam A49-like RNA polymerase I associated factor 73 418 IPR009668 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00352 K03005 - gmx:100812427 618.231