Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00344 ATGAAGACAATAAAAGATTCGCGCCTAGGCATGGGCGATGTGCAGATCCTGCCTGGGTCTCGTCATCGTCCTCCTATGAAGAAGCCAATGTGGATTATTGTCTTGGTTTTATTCGTATGCGTGTTTCTAATATGTGCTTATATCTACCCACCAAAAAGCAGTTCTGCTTGCTACATCTTTTCTTCTGAAAATTGCCGGTCAATTACTGATTGGCTTCCACCAGCTCCTGCAAGGGAATACACAGATGAAGAGATTGCATCACGAGCTGTTGTTAGGGATATTTTGAAAACACCTGTAGTTCTTTCAAAGAATCCGAAAATCGCCTTCATGTTTCTGTCACCTGGTTCTCTACCATTTGAAAGATTATGGGATAAATTTTTTCAAGATGAGGGAGAAGCATCAGGATGTCAGGATTTGATAGAATTTGGAAAATTTATTCCTTCTGTTGGGACGGGACATGAAGGGAAATTCTCAGTATATGTGCATGCTTCTAAGACTAAACCAATTCATGTGAGCCGTTATTTTGTTGACCGGGATATACGAAGTGCTCAGGTGGTGTGGGGTAAAATATCTATGGTTAATGCAGAACGACGACTACTGGCAAATGCTTTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAGAGTGGGTTGTTCTTCTAATTTTTGTTTTCTGCCACCAATCTGGTGTCCTCAACTGATCCAACCTTTTGTTTTTCTTGTTAGCTTTATGGATCCTGGTCCTCATGGCAATGGCAGGTATTCAAAACGCATGTTACCCGAAATTGAGATGAAGAACTTTAGAAAGGGTGCACAGTGGTTTTCAATGAAGCGCCAGCATGCTGTTATAGTTATGGCTGACAACCTGTATTACTCAAAATTTAAGGCTTACTGTCAGCCTGGTTTTGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCTACATTCTTCCAGATTGTTGATCCTGGTGGAATTGCAAATTGGTCAACAACTCATGTTGACTGGTCTGAGAGAAAGTGGCATCCAAAATCATACAGGGTTCGAGATATTTCTTATGAGCTTTTGAAGAATATTACGTCCATTGATGTTAGTGTGCATGTCTCGAGTGATGAGAAGAGACAAGAACAAAGTTGGCCCTGCTTATGGAATGGGATTCAGAAGCCATGTTATCTATTTGCTAGGAAATTCAATCCTGGAACACTGAACACTTTCATCTTGAGCAAGCAATTTTTGATCCATTCTTTGGTCGGATTAGCTGTTGCTTTCGACCTCCTTCTTGGTCTCTCATAG 1302 0.4071 MKTIKDSRLGMGDVQILPGSRHRPPMKKPMWIIVLVLFVCVFLICAYIYPPKSSSACYIFSSENCRSITDWLPPAPAREYTDEEIASRAVVRDILKTPVVLSKNPKIAFMFLSPGSLPFERLWDKFFQDEGEASGCQDLIEFGKFIPSVGTGHEGKFSVYVHASKTKPIHVSRYFVDRDIRSAQVVWGKISMVNAERRLLANALQDPDNQQFVLLSDRVGCSSNFCFLPPIWCPQLIQPFVFLVSFMDPGPHGNGRYSKRMLPEIEMKNFRKGAQWFSMKRQHAVIVMADNLYYSKFKAYCQPGFEGKNCIADEHYLPTFFQIVDPGGIANWSTTHVDWSERKWHPKSYRVRDISYELLKNITSIDVSVHVSSDEKRQEQSWPCLWNGIQKPCYLFARKFNPGTLNTFILSKQFLIHSLVGLAVAFDLLLGLS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00344 433 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 33 408 IPR044174 GO:0016757
Vimu10g00344 433 Pfam Core-2/I-Branching enzyme 153 362 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00344 Vimu-Chr10 2410186 2414982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00344 - - gmx:100817202 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00344 10 2410186 2414982 Vimu10g00344 10 2410186 2414982 ECH