Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00339 ATGGCAACAGTGGCTAATGAGAGCACACAGATGAACACCCTTGTAGTCAGAAAACCGTGTTTTGGTCTCCCCACCGGTTGCCCTCAATGCTTATCTGCCTATATTTTTCTCAAGTTCTCTCAAGTTCCCTTCAACTTGGATTATCACCCTAACTACCCTGATTCTGATCAGATTCCTTACTTTGAGACTGGAGATTGTGTGGCATACAATAATGATAAGGAGGGGATCATTGAGAGCTTGAAAAGGGACGTAGGTGATTTAGATAGTGGTATTTCTTCTCTCCCTGATTGGACGGCAACCAAAGTGTTGCTCACCACATGGCTTGCTGATGCACTGGAGTATGAACTGTGGGTGGGATATAGTGGTTCCTCTGTTAATAAGATCTATTATTCTGATCTTCCCTGGCCTATAGGACGGCTCCTCTATTGGAAGAAAGCTCTTTGGGTGATGCAGAAACATGGGATAAGTAAAGACAATGCTGAAAAGAAGGAAGAAGAGATTTATGGGAGAGCAAACTCTGCATATGATGCTCTGTCAACTTTGTTAGGGGAGCAAAACTACCTTTTCGAAAATAGGCCATCAAGCTTGGATGCTATTTTTCTTGCTCATGCATTAGTTATTCTTCAAGCTTTACCTGAATCATCAATTTTGCGGATCAACTTTTTGGAACATACCATTTTGGTGAAATATGTGCAGCAATGCAATACAAAAATTATAGAAACTAGTGCTTTGCCTTCCAATTATCCAGATTTTCATGCAGAACCGTCATCATCATCATCATCAGATTCTAAAGGTCGTTCAACTTCAGGTTCAAAGCCAAAGACTAAACCTAAAAGAAAGCCACAAACAAAGGAGGAGAAAACCTTTAGAAGAAGGGCTAAATATTTTGTGGTAGCACAGCTAGTTGCTGTTATACTTTTCCTCAGTATCAGGTCTGGATCTGGTGATGATGCTTTGGAGTTAGATGATGTAGGCTATGATTTCGATGAATGA 993 0.4068 MATVANESTQMNTLVVRKPCFGLPTGCPQCLSAYIFLKFSQVPFNLDYHPNYPDSDQIPYFETGDCVAYNNDKEGIIESLKRDVGDLDSGISSLPDWTATKVLLTTWLADALEYELWVGYSGSSVNKIYYSDLPWPIGRLLYWKKALWVMQKHGISKDNAEKKEEEIYGRANSAYDALSTLLGEQNYLFENRPSSLDAIFLAHALVILQALPESSILRINFLEHTILVKYVQQCNTKIIETSALPSNYPDFHAEPSSSSSSDSKGRSTSGSKPKTKPKRKPQTKEEKTFRRRAKYFVVAQLVAVILFLSIRSGSGDDALELDDVGYDFDE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00339 330 MobiDBLite consensus disorder prediction 250 287 - -
Vimu10g00339 330 Pfam Glutathione S-transferase N-terminal domain 28 120 IPR012336 -
Vimu10g00339 330 Pfam Glutathione S-transferase, C-terminal domain 171 233 IPR033468 -
Vimu10g00339 330 CDD GST_C_Metaxin 166 231 - -
Vimu10g00339 330 PANTHER METAXIN RELATED 14 305 - -
Vimu10g00339 330 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00339 Vimu-Chr10 2341698 2349790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00339 K17776 - gmx:100809392 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00339 10 2341698 2349790 Vimu10g00339 10 2341698 2349790 ECH
Vimu7g01364 7 13002308 13005950 Vimu10g00339 10 2341698 2349790 PCT