Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00329 ATGGCTGATGACGATGATGCTCGCATTTCTGGTTCCAAGTTTATCATTGGCGAGATGTTGGGTGGTGCACTTTCAACTTCAATAACTCAAAGCCTCAATGCTACAAGAACAATTGCAATGCTCTATCCAACTCACAGATTATTGTCTCGTAAGTTTCGTAATGGGCATGTATCAATTCGTAGGTATGTGATTCAATTTTATGTTTTTCTAGAACCCAGTGGCAAATACCAGAGGATTTTCGTCAAAAGACACTGTTTTTATCAGGGGTCATCAAATCAATATAAAGAAATTTTTTGGGCTTATCTCGGATCGTGCTCGACTAAACAAAGCAGCAAAGTAGGATTTGTTGTTTCCCCAATCTGTGGCCTGCCACTGACAGAAGATAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAACCATGACATTGAAAATGGGAATAGAAACTCGCCTCAGAGACAAGATACCAGAAATCATGGAAGTGGAACAGATAATGGACACTGAGACTGGCCTCGAGTTAACAGAAGAAAATGTAGAAAAAGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTGAGATGAAAGATTATGTTGTGAAAGTTCGGCTAAGTGGACCAGCAGCTGGGGTTTCGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAGATACCTTCTATTGCAGCTGTGCAACTAATAGACTAA 831 0.4188 MADDDDARISGSKFIIGEMLGGALSTSITQSLNATRTIAMLYPTHRLLSRKFRNGHVSIRRYVIQFYVFLEPSGKYQRIFVKRHCFYQGSSNQYKEIFWAYLGSCSTKQSSKVGFVVSPICGLPLTEDNVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQIMDTETGLELTEENVEKVLSEIRPYLVGTGGGILELVEMKDYVVKVRLSGPAAGVSTVRVALTQKLRDKIPSIAAVQLID 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00329 276 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 125 274 - -
Vimu10g00329 276 Pfam NifU-like domain 211 273 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vimu10g00329 276 Pfam NifU-like domain 130 195 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vimu10g00329 276 FunFam NifU-like protein 3, chloroplastic 205 275 - -
Vimu10g00329 276 Gene3D - 121 204 IPR034904 -
Vimu10g00329 276 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 127 201 IPR034904 -
Vimu10g00329 276 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 205 275 IPR034904 -
Vimu10g00329 276 Gene3D - 205 276 IPR034904 -
Vimu10g00329 276 FunFam NifU-like protein 3, chloroplastic 122 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00329 Vimu-Chr10 2254937 2259121 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00329 - - gmx:100806364 343.199