Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00309 ATGCTGATTTCATGGCTCAATAATGAGAGTAATTTGAGCACTTATTTTCCATTTCAAGTAGAATTAATGATGCAAGTCTCTTCGATCTGTTTAGCAGCTAAGGTTCCTGTTCGCGTGAAGTCACTGCAAACAAACCCAGCAACCATAAACGACCCTACTTCCATAGCTGCTCCTAAGTGGTCTCAAAAGACAATAACATTTCCTCCCCTTAAACGTGGGTGTCATCTAGTAACTTCTAAGATTTTGAAAGAAGTTGGGCAAGAATTGTCTGGATTCAAGTGTGGCCTAGCTCATCTCTTCTTGCATCACACAAGTGCTTCTCTCACCATCAATGAAAATTATGACTATGATGTTCGAGATGACACAGAAACATTCCTCAATCAGATAGTTCCAGAGGCTAGGCCCTTCTGCGCCATGGAAGCACACTATAGAGGATTGTTTCAGAAAGACAATTTAAGAGCAGATGACATGCCGGCACACATAAAATCATCGATGTTTGGTTGTGCACTCACAATACCGATTACAAATGGAAAGCTTAATATAGGAACGTGGCAGTTAGGGATTTTGTTCTTCCCTGCAGGTATGGGTTTTGCGAAGTGGGGGATGAGGGTTCAAATTGTGAATGGTATATGGCTTTGTGAGCATCGAGATTATCCTACACCGCGTACGGTTGTTGTCACTCTTAATGGAATATGA 696 0.4167 MLISWLNNESNLSTYFPFQVELMMQVSSICLAAKVPVRVKSLQTNPATINDPTSIAAPKWSQKTITFPPLKRGCHLVTSKILKEVGQELSGFKCGLAHLFLHHTSASLTINENYDYDVRDDTETFLNQIVPEARPFCAMEAHYRGLFQKDNLRADDMPAHIKSSMFGCALTIPITNGKLNIGTWQLGILFFPAGMGFAKWGMRVQIVNGIWLCEHRDYPTPRTVVVTLNGI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00309 231 SUPERFAMILY YjbQ-like 59 230 IPR035917 -
Vimu10g00309 231 Pfam Uncharacterised protein family UPF0047 77 188 IPR001602 -
Vimu10g00309 231 NCBIfam secondary thiamine-phosphate synthase enzyme YjbQ 72 190 IPR001602 -
Vimu10g00309 231 Gene3D - 53 193 IPR035917 -
Vimu10g00309 231 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 52 231 IPR001602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00309 Vimu-Chr10 2083459 2086999 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00309 - - gmx:100500593 284.648