Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00306 ATGGCATGTGCAAAACTTGTCAGATTAGCCAATCACATGTCCAGCACAAGAAAAATTCACAGTACTGCCAATAGAATGAGCTCAAATTGGAGAGATCATATGAAAAACGAGTTAGAAATTGGACACAGTGGAAAGCAAGAACAAAGTCACCACCCAGTTTGCATATACAGGGTTCCATATAACATGAGAAGGGTCGAACCAAAAGCCTACAGACCCAACAACATCTCCATCGGTCCCTGTCACCACGGAGCACCCCACTTGAGAAACATGGAGGCTCTGAAGAAAAGGTTCTATCGCAGCCTCTTCAACAATGATGCAAATGCAGCCAAGCTAGATCAGGCTTTTAATTTCCTAGAGGAACAAGAAACCAACGTTCGAAGATGTTACAACGAGGACATCAAATTGAGCAGTGACGAGTTTCTACAAATGGTGCTAGTTGACGGTTCTTTCATTGTTCAGCTCTTGAGGGATCTATCAGCGAATGAATTCGGAAAAGTCCGTTCTCTCAGCCCATGGATGTTGCCCATCATTCGTCGCGAGATGATAATGCTTGAAAACCAGCTTCCCATGTTTGTTTTGAGCAAGCTGTTTGAGTTAACTAGTGTTGATTCTTCTCCTTCGGGACCAAATAACTGTCTCCAAGATCTTGCTCTTCGATTCTTTTATCCTTTGCTGCAGGTGGATTCGGATTATACACTGGATACTAAGAAAGTTGGTGAGTTAAGAGGGCTTCACTTCCTCGATCTTCTTAGGTCAGCCATTAGGCCAGATCTTAAGGGAGAAAAACCAAGAGATTTTCAACCTCACATGATTCGTTCTGTAACGGAGCTGATAGAAGCTGGTGTGAAGATCAAAGCAGATGAGAGTAAACAGTTGCTTGACATAAGCTTTGGGAAGAAATGGGGTTTTCTTATAAGACAACTCACTATTCCTCCTTTGTACATCAATGACCACAGAGGCACTGTGTTTCGTAACATAGTTGCTTTTGAGAACTGTCACAAGGATTGCAACCCTGATGTTACAACCTATTTGTTTTTCTTCAACGGACTCATCAACTCTGCTCGTGATGTCTCTCTTCTTCATTACAAAGGGGTGCTTCACCATTCTCTTGGCAATGATAACACTGTCTCTGAACTAATCAACAACGTCACCAAAGAAATTGTTCGGGACAAAAATGAGTCCTACTTGAACAAAGTGGTCAATGGCGCAAACTCGTACTTTGCTTCCTTCTATGCGAGAAAAAGAGCTTCTTTAGTGCATCACTATTTAACCAGCTGGGTGGTGGGGGTTTCAACAATTGGTGCGTTGTTGGCCCTTTACTTCACTTTCATTCAAACTGTGTGTTCATTTGCAGATTCAATCGAAGCCTTTAAAAACCAAAGCTTTAGATCTGCCTTTATAGATGTTTTTTGTATACCAGTTCGTGGTGTTCCTACCAATGATAGGGAAAGTGAAAATAGTAAAACTGAAGATGCTACAATAAAATTACAAAGGTGA 1497 0.4162 MACAKLVRLANHMSSTRKIHSTANRMSSNWRDHMKNELEIGHSGKQEQSHHPVCIYRVPYNMRRVEPKAYRPNNISIGPCHHGAPHLRNMEALKKRFYRSLFNNDANAAKLDQAFNFLEEQETNVRRCYNEDIKLSSDEFLQMVLVDGSFIVQLLRDLSANEFGKVRSLSPWMLPIIRREMIMLENQLPMFVLSKLFELTSVDSSPSGPNNCLQDLALRFFYPLLQVDSDYTLDTKKVGELRGLHFLDLLRSAIRPDLKGEKPRDFQPHMIRSVTELIEAGVKIKADESKQLLDISFGKKWGFLIRQLTIPPLYINDHRGTVFRNIVAFENCHKDCNPDVTTYLFFFNGLINSARDVSLLHYKGVLHHSLGNDNTVSELINNVTKEIVRDKNESYLNKVVNGANSYFASFYARKRASLVHHYLTSWVVGVSTIGALLALYFTFIQTVCSFADSIEAFKNQSFRSAFIDVFCIPVRGVPTNDRESENSKTEDATIKLQR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00306 498 MobiDBLite consensus disorder prediction 481 498 - -
Vimu10g00306 498 Pfam Plant protein of unknown function 55 439 IPR004158 -
Vimu10g00306 498 PANTHER BNAC04G53230D PROTEIN 33 451 - -
Vimu10g00306 498 MobiDBLite consensus disorder prediction 479 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00306 Vimu-Chr10 2067870 2069366 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00306 - - gmx:102663948 769.615