Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00302 ATGTCTCCCAAACCCATTTTTCGGGAATACATTATCGGTTCAAAGGATGTCCCGCCAATTGAAGGTTTCCCAGTAGAAATCATCAACAAAAGAATCCCACAATTCCACTTCATTTTGGCCTTTGCCTCAGATGATTACGTCGAGGATGCTAGCGGCAAGAAACAAGGGAAGGGAAACTTCCGTGCAAATTGGAACGTGACCAAGTTCAGCGCTAAAAGTATCAGAGAACTAAAGGCAGATTACGAGGGTGTGAAGGTGATAATAAGCCTTGGAGGTCGTGGCACCGATTTTCCATTCAATCCTACAGACAAAGAAATATGGATTGACAATGCCAAGAAATCACTGAACGAGATAATATCAGTGCTCTACAAGTTTCATCTTGAAACTGTGATTGATGGCATTGACATCAACTATGAGCACATCGAATCCAGTGAAGATGAATTTGCTTACAGCATAGGCAAAGTCATAGATTACCTCCAAACCACCATCACTAGTGGACTCGTGGTCTCCATTGCACCCTCAAAACCTGTCCTTCCCCACTACCAGCAGTTGTTCAAGGCTAATCCAAACCGTATTCACTGGGTGAACTACCAGTACTACGATCAGAAAGTCCCCAGCACACACGAATTTGTCAACCTCCACAAAACCCTAATAGACACCTTCGGTGTTGACAAACTCTTGGCAGGTTTCAGCACTGATCCAAAAGACAAGGGTAACATATCCCTTGAGGTCTTCGTTGAGGGTGTCCTACAACTCATCGCATCTGGTTCACTTGCTGGAATTTTTGTTTCAGATGCTCAGTCCTCCCGCTTGATTGAGCCTCCCCTCTATGTTGAGAAAAAGGCACAAGAGATCCTCACTGGATCCGATTAG 873 0.4456 MSPKPIFREYIIGSKDVPPIEGFPVEIINKRIPQFHFILAFASDDYVEDASGKKQGKGNFRANWNVTKFSAKSIRELKADYEGVKVIISLGGRGTDFPFNPTDKEIWIDNAKKSLNEIISVLYKFHLETVIDGIDINYEHIESSEDEFAYSIGKVIDYLQTTITSGLVVSIAPSKPVLPHYQQLFKANPNRIHWVNYQYYDQKVPSTHEFVNLHKTLIDTFGVDKLLAGFSTDPKDKGNISLEVFVEGVLQLIASGSLAGIFVSDAQSSRLIEPPLYVEKKAQEILTGSD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00302 290 SUPERFAMILY (Trans)glycosidases 34 263 IPR017853 -
Vimu10g00302 290 Gene3D Glycosidases 3 289 - -
Vimu10g00302 290 Pfam Glycosyl hydrolases family 18 36 217 IPR001223 GO:0005975
Vimu10g00302 290 PANTHER CHITINASE 2-LIKE 5 287 - -
Vimu10g00302 290 PRINTS 2-S globulin family signature 4 17 IPR000677 -
Vimu10g00302 290 PRINTS 2-S globulin family signature 247 266 IPR000677 -
Vimu10g00302 290 PRINTS 2-S globulin family signature 27 46 IPR000677 -
Vimu10g00302 290 PRINTS 2-S globulin family signature 97 111 IPR000677 -
Vimu10g00302 290 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 5 290 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00302 Vimu-Chr10 2051367 2052239 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00302 - - aprc:113852287 308.145