Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00236 ATGGCCAAAGAGAGAGAGAAGAAGCTCTACGTGGCAGTGCTCGGAAACTACGCTGCAGAACTCAAGCTTCTCCTTACAACACTGCTTCTCCTCTGCGTCGTTGCCACGCTTCTTCAGTTCCTCCCTTCCCGCTTCACCATCTCAGCCTCCGATCTCCGAGTCTGCATCTCACGTGTCACGCAAACAACACCCATACCTTCCAACACAACAAACGCTACTTCCTCATACCCACTAAAAGTATCATTATCCCATGCCTCACCACCCCCGCCGCCGCCGTCACCACCTCCACCGCCACCGTCCGAGCAAGTCCTCCCCGGAGGCATCGTCAAGCGTGTGTTCAACCCTTATGGCTCTGCAGCCTACAACTTCATCACCATGGGCTCTTACCGTGGTGGCCTCAACACGTTCGCCATCGTTGGTCTCGCGTCCAAGCCTCTTCACGTTTACGCTAAACCGACGTACGAGTGCGCGTGGCACTCACTCGCCGGCAAGAAACTCTCCACCACCGTCGGCTACAAGATCCTCCCCGACTGGGGCTACGGCCGCGTCTACACCGTCGTTATAGTGAACTGTACCTTCCCGGCTTCACTCAATGCTGACAACTCCGGAGGGAAGCTCGTCCTCTCCGCCTCTACCTCCGGCGGCGGCGACGCCAGCTTCAACATCACCGACACCATAGAAGCTCTCACGGAACAACCCGGCGCACTCGACACTACGTTGTTCACGTCGAAGCCGAAGTACGATTACCTGTACTGCGGTTCCTCTCTCTACGGGAACCTGAACGCGCAGCGCGTGAGGGAGTGGATCGCGTACCATGTGAAGTTCTTCGGGCCGAGGTCGCATTTCGTGATTCACGACGCCGGTGGCGTGCACGCGCAGGTGCGGGAGGTGCTCCAGCCGTGGATTGATTTGGGGTATGTGACGTTGCAGGATATAACGGACCAGGAACGGTTTGATGGATACTACCATAACCAGTTCATGGTGGTGAATGATTGCTTACATAGGTATAAGTTCATGACTAAGTGGATGTTCTTCTTTGATGTGGATGAATACATCTATGTGCCACCCAAGAGCACTATCAAGTCCGTGCTTGATTCACTCTCCGAGTACTCTCAATTCACCATCGAACAGATGCCAATGAGTAGCAAGCTGTGCCTCACTGCCGATTACGGCAAAACCTATAGGAAATGGGGGTTTGAGAAGCTGGTGTATAAAGATTCAAAGAAAGGGATTAGGAGGGATAGAAAATATGCAGTGCAACCTAGGAGTTTGTTTGCAACAGGTGTTCACATGTCACAGAACCTTGCAGGGAAGACAACTCACAAGACGGAGGGCAAAATAATGTACTACCACTACCATGGAACCATAGCTGAAAGGAGAGAATCTTGCAAAATGCTTATAAATTCAACAGAAATCACATACGAGAAAACCCCCTATGTGTTGGACACCACCATGAGAGACATTGCTGGTGTGATCAAGAAATTTGAGCTCAAGATGATTGGAAATAGGCTACAGAAGACACGGCAATGA 1530 0.5196 MAKEREKKLYVAVLGNYAAELKLLLTTLLLLCVVATLLQFLPSRFTISASDLRVCISRVTQTTPIPSNTTNATSSYPLKVSLSHASPPPPPPSPPPPPPSEQVLPGGIVKRVFNPYGSAAYNFITMGSYRGGLNTFAIVGLASKPLHVYAKPTYECAWHSLAGKKLSTTVGYKILPDWGYGRVYTVVIVNCTFPASLNADNSGGKLVLSASTSGGGDASFNITDTIEALTEQPGALDTTLFTSKPKYDYLYCGSSLYGNLNAQRVREWIAYHVKFFGPRSHFVIHDAGGVHAQVREVLQPWIDLGYVTLQDITDQERFDGYYHNQFMVVNDCLHRYKFMTKWMFFFDVDEYIYVPPKSTIKSVLDSLSEYSQFTIEQMPMSSKLCLTADYGKTYRKWGFEKLVYKDSKKGIRRDRKYAVQPRSLFATGVHMSQNLAGKTTHKTEGKIMYYHYHGTIAERRESCKMLINSTEITYEKTPYVLDTTMRDIAGVIKKFELKMIGNRLQKTRQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00236 509 MobiDBLite consensus disorder prediction 83 101 - -
Vimu10g00236 509 Pfam Glycosyltransferase family 92 248 475 IPR008166 -
Vimu10g00236 509 SUPERFAMILY Formin homology 2 domain (FH2 domain) 87 98 - -
Vimu10g00236 509 PANTHER UNCHARACTERIZED 29 467 - -
Vimu10g00236 509 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00236 Vimu-Chr10 1456506 1459247 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00236 K23869 - gmx:100787815 892.108