Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00231 ATGAGAAACAGAGATGACAGATGGATGTCGTTGCAGCTGACATGCAAGGAAAAAGAGTGGAATAACATAAACTGTTCGGTTTCAAAACATGATCGCGTTCTTCCAAAGAGGTTACATCATCACTCTTCCCAACACAACTTCATCGTCATCTTCTTCTCTCTCTCTCTCACCATGACCCCTTCTGTCAATAACCACACAAGTGAAATTGAGTTCACTCATCGTGAAAGTGAAGAAGAGGTAGCACATTTGCATGCAGATTCAGCTCTTTCCATGGACAACAACACAACAATGCAGGTGCATGCAGATCAAAAGTGTATCACTAACAAGAGGTACATGCCCCTTTTGGTGATTAACTATCTCTGTCTCTTTGTGGGTTCTCTTGCTGCTAGTTTGCTCTCTAAGTATTATTTCATCCACAAAGGTTCAAGCATTTTGGTTTCAACCTGGGTTCAAACCGCAGGCTTTCCTCTCTTGATCATCCCAATTTCTCTCCCTTATCTCCTTAAACTCACAAACAGGGTGCCCTTCACCGATTTCACTCCAAGAATGTTAGTTCTTTCAGTTTCAATTGGTGTTATGTTAGGATTCAACAACCTTTTCTTCTCATGGGGAAATTCATATCTTCCCATTTCAACCTCAGCGCTTTTGCTCTCTTCCCAGCTTGTTTTCAACCTTCTCTTCTCTGTCATCATTGTCAAGCAAAAACTAACCTTTTCAAACGTTAACTGTGTCATCCTTCTTACCTTGAGCTCCATCCTCCTAGCCTTGGACTCTAGCCACGAGACACCAAAGGGGCTCACACGGAAGGAATACTTCTTTGGATTCTTCTGCACAATAGCCGCAGGCCTGATGTTTGCGTTCTACCTGCCTCTGATGGAGAAGATCTACAGGAGGGTGAATTGCTACGAAATGGTGATGGAAATGCAGCTCGTGATGGAGGTGGCAGCAACAACACTGGCCACGATTGGCATGGCAGGTGGGGGTGGATTTGCTAAGATGAAGGCAGAAAGTAGAATGGTGTTTGACAAGGGATGCGTGGTTTATTGGGTGACGGTGCTGGGAAATGTGGTGACTTGGCAGCTGTGTTTCATGGGAACTGCAGGAATGGTGTTCTTGACATCTTCTCTGACAGGGGGCATTTGCATGACAGCATTGTTGTCCATGAATGTGTTGGGAGGAGTTCTGGTCTACAAAGATGCATTCGGTGGTTTCAAAGCTATCTCCACCATTCTCTGCATTTGGGGGTTCCTTTCTTATGTCTATGGCATCTACAAACTCAATCGAAAGGAGCAACACAAAGCTCTCACCAGGAACAAGAACCACATCGTCAACATTGTGGCTAACTGA 1347 0.4462 MRNRDDRWMSLQLTCKEKEWNNINCSVSKHDRVLPKRLHHHSSQHNFIVIFFSLSLTMTPSVNNHTSEIEFTHRESEEEVAHLHADSALSMDNNTTMQVHADQKCITNKRYMPLLVINYLCLFVGSLAASLLSKYYFIHKGSSILVSTWVQTAGFPLLIIPISLPYLLKLTNRVPFTDFTPRMLVLSVSIGVMLGFNNLFFSWGNSYLPISTSALLLSSQLVFNLLFSVIIVKQKLTFSNVNCVILLTLSSILLALDSSHETPKGLTRKEYFFGFFCTIAAGLMFAFYLPLMEKIYRRVNCYEMVMEMQLVMEVAATTLATIGMAGGGGFAKMKAESRMVFDKGCVVYWVTVLGNVVTWQLCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYKDAFGGFKAISTILCIWGFLSYVYGIYKLNRKEQHKALTRNKNHIVNIVAN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00231 448 PANTHER OS09G0467300 PROTEIN-RELATED 107 433 IPR030182 GO:0015211|GO:0016020
Vimu10g00231 448 SUPERFAMILY Multidrug resistance efflux transporter EmrE 164 260 - -
Vimu10g00231 448 Pfam Purine nucleobase transmembrane transport 114 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00231 Vimu-Chr10 1402610 1403956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00231 98 422 Organic Solute Cotransporters AT1G30840 63.063 4.93e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00231 - - vum:124830885 791.956