Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00208 ATGGAATACAGAACCTTAGAACTCAACATCATATCAGCGAAAGACATAAAGAATGTTAATCTTTTTTCGAAGATGGACGTTTACGTCGTCATTTCGCTCACCGGTGACCCTTTTCATCTTCAAAGTGCAACCACCCATGTGGACAAAGATGGCGGATGCAACCCCAAGTGGAACTATCCGGTGAAATTCTCCGTCAACGAAGCGCTGGCAAAGGAGAACCGTTTGACCCTCGAGGCCAAGCTCATCTCCGACCGCACCCTCGGCGACACCGTCATCGGCACCGTCCATGTTCCTCTCAGGGAGCTAGTCGACAACCCCGGCGAAGACAACGGCTTCCGACACGTCAATTACAAGGTCGTCAAATCTTCAGGAAAATCCAAGGGATCGTTCAATTTCTCTTACAAATTCGCTGAAAAGGTCTCTAATTCCACCGCCGCCGGAAGGATGTCCGCCCCGGCATCAAAAACAGAAACGGAGCCAGTGATGGCTTACCCTCCTCAGACCTCCGCGGGAACAAGTGCAATTCCTTACGGAACATCACATCCTCCGCCGCCCAACCCGGCTGCACAATATGGATACCCACCCCAACAACCGTCTTACACCGGATACCCACCGGTTAATGGGTATCCACCTCAACAGAGCTACGGTGGATACCCCCCACAAAAAAACGGATATGGTGGATACCCACCGCAAAATGGTTATGGTTATGGATATCAAGGGTACCCTCAACAAGGTGGATATGGATACCCACCCGCCCAGAAACCAAAGAAGAACAATTTCGGAATGGGGTTGGGAGCGGGTTTGCTTGGTGGTGCCTTGGGTGGTATGTTTTCGGAGATATGGTATCTGATGCTGCGGATTATGATGCTGGATACGATGCTGGATTTGATGATGCTGGTGGATTTGATTTTTAAACCTGTTCTTTAG 927 0.5005 MEYRTLELNIISAKDIKNVNLFSKMDVYVVISLTGDPFHLQSATTHVDKDGGCNPKWNYPVKFSVNEALAKENRLTLEAKLISDRTLGDTVIGTVHVPLRELVDNPGEDNGFRHVNYKVVKSSGKSKGSFNFSYKFAEKVSNSTAAGRMSAPASKTETEPVMAYPPQTSAGTSAIPYGTSHPPPPNPAAQYGYPPQQPSYTGYPPVNGYPPQQSYGGYPPQKNGYGGYPPQNGYGYGYQGYPQQGGYGYPPAQKPKKNNFGMGLGAGLLGGALGGMFSEIWYLMLRIMMLDTMLDLMMLVDLIFKPVL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00208 308 Gene3D C2 domain 4 138 IPR035892 -
Vimu10g00208 308 Pfam C2 domain 5 106 IPR000008 -
Vimu10g00208 308 PANTHER INGRESSION PROTEIN FIC1 1 267 - -
Vimu10g00208 308 MobiDBLite consensus disorder prediction 145 206 - -
Vimu10g00208 308 MobiDBLite consensus disorder prediction 178 205 - -
Vimu10g00208 308 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Vimu10g00208 308 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Vimu10g00208 308 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
Vimu10g00208 308 SMART C2_3c 5 111 IPR000008 -
Vimu10g00208 308 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00208 Vimu-Chr10 1264792 1265718 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00208 - - gmx:100217337 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00208 10 1264792 1265718 Vimu10g00208 10 1264792 1265718 ECH