Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00201 ATGGCTTCTCAAACCTTACACGACGCAAAGAAATCACAAGCCAGAAGAGCATTACGATCCCTAGCCATAGGCATAGCAGTTCCCTTCAGCCTAACACTCACCATAATCATTCTTTTCGGTTCGGGACGAAGGTACAACAGCGTGTCAAAGCCCTTCTGGTTTGCACCACTATGGTTCATTAACTTGGCTTCCTTAGCTTCGTCTTTGTTCATGGGTCTTGCAGCATGGTTAGTCTGGGCTGACGGTGGCTTCCAAGGAGAAACCGATGCAATGTCTCTTTACATAGCTCATCTCTCTCTCAGCATTGTCTGGCACCCTCTTGTCCTCATCATGGCTGCTTATTGGCTTGCTTTGCTTTCTTCCATCGTCAACTTTTGCACCCTCTTTATGTGCTACTTGAGGTTTAGAAAGATTAACCCTTTTGCCAAAGATCTAGCCAAACCTTGTTTGGCTTTCGCTTTGTATCTTTCTCTTGTTAGCTTCAAGCTAATGTTTATCTGA 501 0.4491 MASQTLHDAKKSQARRALRSLAIGIAVPFSLTLTIIILFGSGRRYNSVSKPFWFAPLWFINLASLASSLFMGLAAWLVWADGGFQGETDAMSLYIAHLSLSIVWHPLVLIMAAYWLALLSSIVNFCTLFMCYLRFRKINPFAKDLAKPCLAFALYLSLVSFKLMFI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00201 166 Pfam TspO/MBR family 42 164 IPR004307 GO:0016020
Vimu10g00201 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
Vimu10g00201 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Vimu10g00201 166 Gene3D TspO/MBR protein 15 165 IPR038330 -
Vimu10g00201 166 FunFam translocator protein 2 17 166 - -
Vimu10g00201 166 CDD TSPO_MBR 21 158 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00201 Vimu-Chr10 1216770 1217270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00201 K05770 - gmx:100790873 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00201 10 1216770 1217270 Vimu10g00201 10 1216770 1217270 ECH