Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00198 ATGGCTCTCAGACCCATCGACAACGCTCTCCCAACAACAACACCAGAGAGGCCCAAAAAGCAACCCAAGATCGCTGTTGCAACCCAAAAGCAGCAAGATCGTGCTGGTGTCGTCAATGGCGAAAACCAAGTTCCCTTGCCCTCATCAGGGGATGCCACTGTTGACTATGTCTCCTCCGACAACCTTAAACCCTTGTTGGATCCCGAAGTTCAGATTCAGAGTTTGATTGAAGATTTGAATTCGAAAAATTGGACCAAAGTTTGTGAGTCTCTGAACAATGCTAGGCGATTTGCAGTTTTCCACTCACCCCTTCTATTCCCTATTTTGGGAAATATTGTGTTGGTGGTGGCGAAGACAATGAAGAACCCTCGTAGTGCCCTTTGCAAAACCGCAATTATGGCTGCTGCTGATATTTTCAACGCCTTTGGTGACAAGTTGCTTGACCCCGAGACCTCTGATGCATTTGATGGCTTGCTGCTGCAGCTGCTACTAAAAGCTTCTCAAGATAAAAGGTTTGTGTGTGAAGAAGCTGATAGGGCACTTGGCTCAATGGTTAGTTCGATGACCCCTCTTCCTCTGCTTCAGAAACTAAGGGTATATGTGAGTCACAAAAACCTTAGGGTCAGGGCCAAGGCTGCTGTTTCTCTCTCCAACTGTGTCTCAAAGATGGTGAGTAGACATTACAATCACATGGTAGACATTAACTCTTTCTTTTACGTTGTTGTTTTTGTGCCTATGCACTGTTCTAAGGGTCTTGAAGAAATGGAGCAGTTTGGGTTGGCTGAACTGATTGAAGTGGCAGCTGATTTACTGAATGATAGACTTCCAGAGGCAAGAGATGCAGCCCGAAGTATTGCAACTGACGTGTATGAGGCACTGACTAAGGACGCAGAACAGAAGATGGAATTGTGGCAGAGCTTCTGCCAATCCAAGTTGCCACCAATTCATGCACTTTCAATGTTGAAAATAGTTAAGCCCTGA 981 0.4567 MALRPIDNALPTTTPERPKKQPKIAVATQKQQDRAGVVNGENQVPLPSSGDATVDYVSSDNLKPLLDPEVQIQSLIEDLNSKNWTKVCESLNNARRFAVFHSPLLFPILGNIVLVVAKTMKNPRSALCKTAIMAAADIFNAFGDKLLDPETSDAFDGLLLQLLLKASQDKRFVCEEADRALGSMVSSMTPLPLLQKLRVYVSHKNLRVRAKAAVSLSNCVSKMVSRHYNHMVDINSFFYVVVFVPMHCSKGLEEMEQFGLAELIEVAADLLNDRLPEARDAARSIATDVYEALTKDAEQKMELWQSFCQSKLPPIHALSMLKIVKP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00198 326 PANTHER CLASP 24 301 - -
Vimu10g00198 326 Gene3D - 51 313 IPR011989 -
Vimu10g00198 326 SMART TOG_3 61 318 IPR034085 -
Vimu10g00198 326 MobiDBLite consensus disorder prediction 25 49 - -
Vimu10g00198 326 MobiDBLite consensus disorder prediction 1 49 - -
Vimu10g00198 326 SUPERFAMILY ARM repeat 72 299 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00198 Vimu-Chr10 1198226 1199760 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00198 - - gmx:100806408 509.605