Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00192 ATGGAAATGGAGGAAACTGTGGCTCGTGTAATCTCTGAGATAGAGGAATTCCGCGGAAGCCATGAACAACCACCGCTTTCAGAACAAACCCTAAGGGATCTTCAAATTCTCCTCAACAATTCTCTATCGGAGAGCCTCTACGATGAGCTTCCATCGAAGAATCTCTCTCCCTCTGCTCTCATCGCTCCAATTGCTTCCGCAATGGACTCTTCCCCTTCCCATCACTCTCTCCTCGCTTCCGATGTCTTCCTCTCGCTCCTCCTCGCCCCAAACGCTCCCGTTTTCACCCTCTTCACTCCCATATCCTTCCTTTCCTTCCTCCGCTCCCTCCGGCGCTCCTGCAAAGCTCATTCCAACCCAGGCCCGGCTCAAGAGACCTCGCAAAATCGAAAGAGAAAGCGTGCTGGACGGATCCGTGCCAAAAATCCCCAAAACGACAACGATTCGACGGACACCAGTTCGCAACACGACCCCAAGTTGCTCCTCCGCGTGCTGGAGAAGCTAGTCCGGGTAATGGACTTTATCCACCTGGACCGTTTTCCGGAAACTCTCCGGTCGCTTGCCCAAACCATCGCCGAAATCCCCGTCACTGCGCTCGACGCGTGCGGCAACGCGGCGCAGTATAGCAAGTTGCTCAACCTGTGTTCTCGCGTGCTGAGGGAGGTTCTCAAACCTGAGCATGGGGAACCTTCCAACTCTGCCGCCGAGGTATTGAAGTCGCTCTGTCCGCTTGTTCTAATGGCGAAGTCACAGGCCCGGAGCTTTGCTCTTGAATTTGTAACAAGTCTTGGTGACCGGTGCGATGGGGTTAAGAAAGCGCTGGTTAATTTTCCGAGGTATTTGGTTAAGAAGGCGCCAGAGAGGGCCGAGCCTAGAGCCTTGGCTGTGGACTCCATCATTGAGGTTGTCAGGGCGGTGAAAGTTGAGGATCAGATTGCGTTTGTGAAGTACGTGGTGCATATGACTCAGGGGAAGGCGAATCTTCGGCTTTTGGCGGTTGATCTTATACTGAATTTGATGACTTCTTTGAAGGATCCATTAGGTGTGGAGAGTGAAGGCAGTGAGGCGTGGGGAATGTGGTGCTTGGAGGCGTTGATGAAGAGGTGTTCTGATGTGAGTGGCGCGATCCGGGCGCGGGCTTTGTCGAGCTTGGCGCAGCTTGTGGGTTTGTTGTCCCGTGGTGAAAGGACTAGTGTGGTTTTGAAGGAGTTTTTGGGGTTTGGAAATGTTAGTGGTGAGAATGCTGGGGGTACAATGAATGATATGCTGAGGAGAAGGTGTATGGATGATAAGGCAGCTGTGAGGAAAGCAGCATTGCTTTTAGTTACTAACCTGACTTCTCTTCTTGGAGGTGCAATTGATGAAGTGGTTCTCAAGACAATGGGCATGGCTTGTTCGGATCCACTTATCAGCATGCGGAAAGCCGCTATTGCAGCTCTTTCACAGGCTTTCAGAACGTTCTCTTCTGAAGCAGTAATAACCGAGTGGCTACATTCAGTTCCCCGTCTGATAACAGACAATGAATCAAGCATCCAAGACGAATGTGAGAACGCTTTTCAAGAACTTGTTTTGGACCGGATATCTAAAGCTGCATCTGCTTCTTCTTCATATACTGTATCTTCTCATAGAAAGATGAAAGGAAAATTTATAGACAATGAGATGGAGATGCTTTTTCCCGACGGAATTCTGTATCTCCTAAGAGAGGTTTGCAACGGGGAGGTGAGCCCTTGGGTAAAGAAAATTTGCACAAATCTGGGCAAAAAGAAACGGATGAATAAGAAAATTGTTATTGCACTGCAAAATATAATTAGGGAATCGGAATCTATCTGGCTGAGTCATTCCATGCCTATTGAAAAGTGGACTGCTCCGCCAGGTGCTTGGTTTCTTTTGTCAGAGGTATCAACATTCCTTTCAAAAGCAGTAGACTGGGGTTTTCTTCATCATCACTGGCAGCTTCTCGATAAACATGAAGTGGAAGGTGAGTTCAAAAGCCCGATTGCACAGAAACAATCATCTGAAGAAGAAAGCACAGAATGCAATACTGTTGCCTGGGCTAGCGACCGAGTTTTTCTCTTACAAACAATTTCTAATGTTTCTGTGGAGCTGCCCCCTGAACCCGCAGCTGATTTAGCTCATAACTTGCTCAAACGAGTTCAAGCATTCAACATGCATTCGACGGAGGTTGACGCTCATTTAAAAGCACTAAAAACATTATGCAAGCGGAAAGCTTCAAATCTCGAAGAGGCAGAATCATTAATCTTGAAATGGATCGACCAAGTTCTCGCCAGGTCTTCTGGAATAATAGAAAAATTCATTTCAGATAATTCAGAAAAAAATGCGGAAGGAAGCTTCTTCACTCCTCCCAGAAGTGGGACTAGGAAAGGCAGGAAATCAGTAGCAATTTCCAAGGCATTGTCTAAAGCAGTTACAGCGATTTATACAGTTGGGTCTCTGGCTATTGTTTGCCCATCGGCTGATATGAGCAATGTAGTTCCCCTATTGCATACCATCATTACTTCTGGGAGTTCTGGTCCTAAATTAAATAACCTACCTGGTCCTTCAACTTCTTTACAACATGAAGCTCCTTCTTTTTATATTCAGGGGTGGCTTGCCATGGGCAAGCTTTGCCTCGCTGATGGGAAGCTAGCCAAGAATTATATTCCTCTGTTTGTACAGGTAGTTCCTGAGCTTGAAAAGAGCGAATCTGCAGCACTTCGCAACAACATTGTGGTCATGATGGCAGATTTTTGTGTCCGGTACACCGCACTTGTTGATTGTTACATAACAAAGATCACAAGGTGCCTCTTAGATCCTTGTGAACTCGTGAGAAGGCAAACATTCATATTGCTATCCAGATTATTGCAGAGGGACTATGTGAAATGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTTGTTGACGAATCAGAAAAGATAAGACAGCTAGCGGATTTTCTTTTTGGAAATATTTTGAAAGTCAAGTCTCCACTTTTAGCATACAATAGTTTTGTTGAGGCTGTCTTTGTACTGAACGATTGTCATGCCCATAATGGACATCGTGAGTCCCATGGGTCGCGAAAGGAAAGTCAAAGTTTTTCCATCAGGGGTACTGATGAAGAGCCAAAGTCCAAAAGGATGCACATTTATGTCTCTTTACTGAAACAAATGGCTCCGGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTCAATATAGAAGATGCAACTGCACAGTCTGTTCTAGAGGATGCTTTTCGAATTCTTGGCTGTAAAGAGATACGCATTCCATCTACTCGAGCATCATCAGAGTCAGCAGACATAGATGAAGAAGGAGACAATGGATCTGCAGCTAGAGGAAAGGCCGTAACTCAGGCAGTCAAGAAGAGCCTTATCCAAAATACAGTCCCCATCTTCATAGAATTAAAACGTCTATTGGAAACCAAGAATAGTCCCCTGATAGGGTCTCTCATGGAGTGCCTCCGGATTATTCTAAAGGACTACAAGAATGAGATTGACGACATATTGGTTGCTGATAAGCAGCTGCAGAAAGAGCTTATTTATGATATTCAAAAATATGAAGCTGCAAAAGCTAAAGCAACAGTTGCTGAATCTGTGGTTGGAACCAAGCCAAAATCAGGTTCAAATCAATCACCTGATGCTTCTAAGAGCCTGACAAAGACACAAGGAAAAGCAGTTGGACAAAGTATGTCAAGTGACAAGCTTCCAAGTGATTCAAGAGTCGCTTCAGCAATGGCAGATGCTGCAGCTGCAGCAACAGCTCGTTCTGTGCTCAGGGAAATAAACAAGGGAACGGGTACACCACCTCTTCGTTCTTGTAGTGTTCCTAAAGTCAAGTCTCCTACTGGTATGTTTAATTTCAAAGATGTGAATCGCAGGGATGCCATAGAATCTGTAAGGAAAAAACAGTCTTTCGATTCTGATGAAGAAAACTAA 3990 0.4564 MEMEETVARVISEIEEFRGSHEQPPLSEQTLRDLQILLNNSLSESLYDELPSKNLSPSALIAPIASAMDSSPSHHSLLASDVFLSLLLAPNAPVFTLFTPISFLSFLRSLRRSCKAHSNPGPAQETSQNRKRKRAGRIRAKNPQNDNDSTDTSSQHDPKLLLRVLEKLVRVMDFIHLDRFPETLRSLAQTIAEIPVTALDACGNAAQYSKLLNLCSRVLREVLKPEHGEPSNSAAEVLKSLCPLVLMAKSQARSFALEFVTSLGDRCDGVKKALVNFPRYLVKKAPERAEPRALAVDSIIEVVRAVKVEDQIAFVKYVVHMTQGKANLRLLAVDLILNLMTSLKDPLGVESEGSEAWGMWCLEALMKRCSDVSGAIRARALSSLAQLVGLLSRGERTSVVLKEFLGFGNVSGENAGGTMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDPLISMRKAAIAALSQAFRTFSSEAVITEWLHSVPRLITDNESSIQDECENAFQELVLDRISKAASASSSYTVSSHRKMKGKFIDNEMEMLFPDGILYLLREVCNGEVSPWVKKICTNLGKKKRMNKKIVIALQNIIRESESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKAVDWGFLHHHWQLLDKHEVEGEFKSPIAQKQSSEEESTECNTVAWASDRVFLLQTISNVSVELPPEPAADLAHNLLKRVQAFNMHSTEVDAHLKALKTLCKRKASNLEEAESLILKWIDQVLARSSGIIEKFISDNSEKNAEGSFFTPPRSGTRKGRKSVAISKALSKAVTAIYTVGSLAIVCPSADMSNVVPLLHTIITSGSSGPKLNNLPGPSTSLQHEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQVVPELEKSESAALRNNIVVMMADFCVRYTALVDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHNGHRESHGSRKESQSFSIRGTDEEPKSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATAQSVLEDAFRILGCKEIRIPSTRASSESADIDEEGDNGSAARGKAVTQAVKKSLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKATVAESVVGTKPKSGSNQSPDASKSLTKTQGKAVGQSMSSDKLPSDSRVASAMADAAAAATARSVLREINKGTGTPPLRSCSVPKVKSPTGMFNFKDVNRRDAIESVRKKQSFDSDEEN 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 142 156 - -
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 1215 1258 - -
Vimu10g00192 1329 Gene3D - 360 532 IPR011989 -
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 1308 1329 - -
Vimu10g00192 1329 SUPERFAMILY ARM repeat 325 1181 IPR016024 -
Vimu10g00192 1329 Pfam non-SMC mitotic condensation complex subunit 1 905 1082 IPR032682 -
Vimu10g00192 1329 Coils Coil 732 752 - -
Vimu10g00192 1329 PANTHER CONDENSIN 10 1310 IPR026971 GO:0007076
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 1278 1329 - -
Vimu10g00192 1329 Coils Coil 1176 1196 - -
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 1019 1040 - -
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 115 156 - -
Vimu10g00192 1329 MobiDBLite consensus disorder prediction 1219 1256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00192 K11491 - gmx:100781242 2131.29