Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00179 ATGATAATACCAACAAGAATAGTTATTATTATTATTATTATTATTATTATTATTATATCAATACCAACATTTTGGAAAATAACGAAGCACGGATCGACTGAAGATTTCTCAAGCCTTCCATACATTTGCACATTGCTTAACTGTTGTCTGTGGACTTACTATGGAATCATAAAATCTGGAGAGTACTTAGTGGCAACTGTTAATGGTTTTGGCATCTTGGCTAGAACTGCTATTCTGGCTGTGATTTTGGATGTGGTGATCTTTGCAGCAGCAGTGATTACAACCCTTTTAGCTTTGCAAGGAGATTCTCGAAGTGGTGCAGTTGGTATTATGGGAGCAGGTTTGAACATTGTTATGTATTCTTCACCTCTTTCTGTCATGGTGCCAAACGGTACTGGATTTTTGCTGGGGACGATACAACTGGTGCTATATGCAATCTACAGAAATGGTGGAAAAGAAGCTTCAAAGAACAGATTGGAAGAAGGGTTACAACATGAACCACTGATCTCATCACAGCCAAATAACGAGTCATATCAGAGGGAACACAGGGCCACCTAG 558 0.3871 MIIPTRIVIIIIIIIIIIISIPTFWKITKHGSTEDFSSLPYICTLLNCCLWTYYGIIKSGEYLVATVNGFGILARTAILAVILDVVIFAAAVITTLLALQGDSRSGAVGIMGAGLNIVMYSSPLSVMVPNGTGFLLGTIQLVLYAIYRNGGKEASKNRLEEGLQHEPLISSQPNNESYQREHRAT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00179 185 Gene3D - 4 86 - -
Vimu10g00179 185 PANTHER RAG1-ACTIVATING PROTEIN 1 128 153 IPR047664 -
Vimu10g00179 185 MobiDBLite consensus disorder prediction 163 185 - -
Vimu10g00179 185 Pfam Sugar efflux transporter for intercellular exchange 8 79 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00179 Vimu-Chr10 1079260 1083501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00179 11 170 Miscellaneous Gene Families AT4G15920 37.719 7.49e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00179 K15382 - gmx:100808537 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00179 10 1079260 1083501 Vimu10g00179 10 1079260 1083501 ECH