Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00177 ATGAGTGAAGAAGTGAAAAAGAACTTTGCCGGACCTCCAACGGCGAGGCTCAACGCCGATGACCGGAAACCGTTACCGGCACCGGCCGTTCCCCCGAAGAAGGTCATCATCAAGAGCGCCGACATGATTCCCGACATGCAGAAGGAGGCCGTTGATATCGCCGTCGCCGCCTTTGAGAAGTACAATGTGGAGAAAGATGTTGCGGAGCAGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCGTAATTTTGAACTGATGCTGAAACCTTGGTTTGTTGTTGTTGTGGCATATGGATGA 321 0.514 MSEEVKKNFAGPPTARLNADDRKPLPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFELMLKPWFVVVVAYG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00177 106 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 32 97 IPR037177 GO:0007017|GO:0030286
Vimu10g00177 106 SMART Dynein_light_2 30 97 IPR001372 GO:0007017|GO:0030286
Vimu10g00177 106 FunFam Dynein light chain 31 102 - -
Vimu10g00177 106 PANTHER DYNEIN LIGHT CHAIN 33 93 IPR001372 GO:0007017|GO:0030286
Vimu10g00177 106 MobiDBLite consensus disorder prediction 1 30 - -
Vimu10g00177 106 Pfam Dynein light chain type 1 34 92 IPR001372 GO:0007017|GO:0030286
Vimu10g00177 106 SUPERFAMILY DLC 31 93 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00177 Vimu-Chr10 1068888 1069503 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00177 K10418 - gmx:100305908 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00177 10 1068888 1069503 Vimu10g00177 10 1068888 1069503 ECH