Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00169 ATGACTAAGAGTACCTTGGAACCCGGGGGGAGCGGAGGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCTAACTGGGAAGTTGACCTAGCCAAAAAACTCGAGGAGTATTTGCTGAAAATTTGTTCAGGCGAAATCACCGGCGAGGAAGAAGGACATATTCCTGTGAACTTTGCCGAAGCTGCTCTACTGCTTCAGGGTTCCATACAGGTCTATAGTCGAAAGGTGGAGTACCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTCCTTTCCCAGAAAAGACAGCAAGATCATGAAGATGGGGAATCGGTCCAACCTGAAGAAATGGGTTCCCGTGCTGTTGCTGATGAGGAAAATGATCGATTTTGGGGCTTAGATGACATCCAAGGATATCATCAATTAAGTTCGGTCATCATGTTATTGGTGGAACCTGGTTCTCTCTGCTTTGGACCTCTGTCAAAATCAGACATTTATTCATTTTATTCGCAATATCTTAATTCTTGGACTTCTGCCTTCCCTCAAATTGTCTTCTTTGAAGAAAAGAATTCCTTGGATGACACAACAGGCAAAGAAGTAAATTTGGATCACTTTATAAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGAGAATTGGAGTCTTTTCTGTTGTCCACCACAGACCTGTACCAGGACTTCATCTTATTGGACACATCCTATGCTGTTGCAGTTCATGAGTTTTTGGAGGGTACCAAAGCTGCCAAAACTCGAAATGATGCTAGTAGAAGAACCCCAGGTCGTAAAAGCTTTCTTTCTCCTAGACGTTCTGGTGGAAGTGCTCGTAGATTATCTGCTGCTAAGAGTCAGTGTGCGAATTCCAACTGCTCCCCTAAACTTAATAGTGGTTTTGATGATGAAAACGTCCGGCCCAGTTTTCCTGCTTCTGATGGTCCTGATGACTGCAATTATGGATTTGATATGGGTCAGGGATGTGAGGCATCTAGGGATTCAGACAATTCAGATGACGATAATGATGATCCATGGAAACCTCTAAATCCTCATGAACAGGGCAACTTGAGGGTGAAGCCATTCAAAAAAGTGAAAATTTTAAAAAAGAATAACATTAATGTGAGACAACCAGTTCCTATGAGCTCCTTGTTTCCACTTGCAAAATTGCATGGCCCTATCAGTCCAGAGCTCGTGGAACTGTGGGAGAGGCAAAATAATGCTCATGAAAGACAAAGGGATTTTCAAGCTCCATTCTATGAGAAGCTGAGGCAATCTCTTGTTAACGAGGGGAATGAAACTGGTGTAACATTTAACACTGAAGGGGACAATGATGACATTGAACATGACAGTGGAATTCCTGATTTTGATATGCCAGACAATGCTTTCATGGAAGAAAATCTACCACCTTTCAATAACGAGCCTGAGTTTGATGATACTGATGTCAATGTTGATGAAGCCGTAGATCTTTCTCAGACAAGTTTGGAAGATCTTTGCCGCTCTCATCTGAATGCTCTCCTAGCAAGCATTGCTGAAACTGAGAAGCAGACTGAAATGGCTGCTAGGGTTTCAACGTGGAAACAAAGAATTGAACATAATTTGGAAGAACAGGAATCACATCCACCATTTGATATCCAAGATTATGGTGAGAGAATTCTTGATAAGTTCTCTCTGCTCTCCCTTGAAGCAAGCAGTAGCCGTGTCCTGTCCTTTTCTGATTTGGTCAAGGGTCAGGAAAAGTATGACGTGGCCCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAATGGAGAAGTAGCTCTAGAAAGAAATGGAATTGAGGGGAAGTCTGTCTGCTACACATCTGTTAATCCCTTTCATGTTAAGCTCCTTAAGCATGGTAAGGAACGGGAGAATGCACAGTTTGCTTTGCCAAAAAAGAGAGCAAAGTCTCCAAAAAAACCCTCTACAAAAGGTGATAAGAACAAAACTGAAAGAGAAAAGTCATCAACGAAAAATCATTCTACAAAAGGTCATGAGAACAAATTTGAAAGAGAAAAATCTCCCACATCTAGGAGAAATGGATCTACTGGTGTGTCACCACCAACAAATTGTAAACTTTCTGTAAAGCTTGGAAAGGTGAGTGCAATAAAGTTATCCCCTGAAGCCAAAAGAAGGCGTAGATCACAGTATGTTGAACCAGTTAATTTACATTCAGCAGGGTGA 2226 0.425 MTKSTLEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHEDGESVQPEEMGSRAVADEENDRFWGLDDIQGYHQLSSVIMLLVEPGSLCFGPLSKSDIYSFYSQYLNSWTSAFPQIVFFEEKNSLDDTTGKEVNLDHFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLYQDFILLDTSYAVAVHEFLEGTKAAKTRNDASRRTPGRKSFLSPRRSGGSARRLSAAKSQCANSNCSPKLNSGFDDENVRPSFPASDGPDDCNYGFDMGQGCEASRDSDNSDDDNDDPWKPLNPHEQGNLRVKPFKKVKILKKNNINVRQPVPMSSLFPLAKLHGPISPELVELWERQNNAHERQRDFQAPFYEKLRQSLVNEGNETGVTFNTEGDNDDIEHDSGIPDFDMPDNAFMEENLPPFNNEPEFDDTDVNVDEAVDLSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIQDYGERILDKFSLLSLEASSSRVLSFSDLVKGQEKYDVARSFSSLLQLVNNGEVALERNGIEGKSVCYTSVNPFHVKLLKHGKERENAQFALPKKRAKSPKKPSTKGDKNKTEREKSSTKNHSTKGHENKFEREKSPTSRRNGSTGVSPPTNCKLSVKLGKVSAIKLSPEAKRRRRSQYVEPVNLHSAG 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00169 741 MobiDBLite consensus disorder prediction 637 741 - -
Vimu10g00169 741 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 202 348 IPR031719 -
Vimu10g00169 741 MobiDBLite consensus disorder prediction 260 365 - -
Vimu10g00169 741 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 182 735 IPR031739 GO:0030261
Vimu10g00169 741 MobiDBLite consensus disorder prediction 655 691 - -
Vimu10g00169 741 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 352 639 IPR031737 -
Vimu10g00169 741 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Vimu10g00169 741 MobiDBLite consensus disorder prediction 287 306 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00169 K11490 - gmx:100786571 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00169 10 1013270 1019082 Vimu10g00169 10 1013270 1019082 ECH