Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00134 ATGAATGCAGGTGGAAAAGAAAACGGAGCCAAATCAGAATGTGTTTATAGTAGTAGTGGGAAAGTGCCATTACTATGTGCTGTTTCTGCTTTTGTTGGACTTGCCTTTGCCATGGTCACGCAACACACTTACATGTTGATAGCACTCAGTAAATCATCACCTTCTTTGCTTACCTGGGATCCTGATTCTCCCTCTGCCAAGTCCCTAACATGGCAAGCAGCCTTTTTCTTTGTTACAACTTGGATTTGTTTTGGAGTTGCGGAGATTTTGTTGTTGGCAGCACTGAGTGTAGAGTCAGGCCATCTGAAGAATTGGTCGAAGGCAAGAACAGGTTGCTACAGCATCAGAGAAGGGTTGTTTTCTGCTGCAGGGGTGTTGGCTTTGACCACAGTTTTCTTGGCTGCTGGTTTATACTTAACAGCACTACGTGCACAGAAAATGGCAGAGGAAGAAGCCATTGTAAGAAGAGAGGTTCTGGAAACCTCTGCCTTGTATGCTTCTCCACCAAGATCACCCCAACCACAGTACATGTCAACCGTTGCAAGGGAGAACCCCACAAGCAGAGAGAACCAGAATGAGCTTCTCTTATCTGTGTTTCCAACTCCATTTGTTAAAGGTTATGACTTTGTTTGA 633 0.4471 MNAGGKENGAKSECVYSSSGKVPLLCAVSAFVGLAFAMVTQHTYMLIALSKSSPSLLTWDPDSPSAKSLTWQAAFFFVTTWICFGVAEILLLAALSVESGHLKNWSKARTGCYSIREGLFSAAGVLALTTVFLAAGLYLTALRAQKMAEEEAIVRREVLETSALYASPPRSPQPQYMSTVARENPTSRENQNELLLSVFPTPFVKGYDFV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00134 210 Pfam Protein of unknown function (DUF1218) 30 131 IPR009606 -
Vimu10g00134 210 PANTHER OS07G0462200 PROTEIN-RELATED 12 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00134 Vimu-Chr10 790147 791199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00134 - - cam:101488785 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00134 10 790147 791199 Vimu10g00134 10 790147 791199 ECH
Vimu7g01741 7 16074674 16075704 Vimu10g00134 10 790147 791199 PCT