Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00087 ATGTCGCAGCTATCCTTCAAACCAACTCCTTTTCTTCTGTTCTTCCTAGGTTTCTATGTCGCACTCTCTACTCCGGAGGATCCCATCAACTGCACCTCACACAAAACAAACTGCACCATCACTAACTTCTGTGGTACATTCCCTGATCGAAGCATCTGTAAAGCACAAAAGGTGTTTTACCCCACACAAGAAGAAGATATTCTCAGAGTGGTTGCATCAGCCACTCGAAAAGGAAAGAAGATGAAAGTTGCGACCAGTTCCTCCAACAGCATCCCCAAGTGGGTGTGCCCTGAAGGTCACAATGGGTGGCTAATAAGCACCAAATATCTCAACCGGGTAATGGAAATTGACGCGGAGAAAAGAACGGCGAGGGTGCAGAGTGGCGTGACGTTGAAGCAGCTGATGGAGGAGGCTGCGAAGGCGGGCTTGGCCTTGCCATACACTCCGTACTGGTGGGGTTTGACGATGGGGGGCATTTTGGGGACAGGAGCTCATGGAAGCAGCTTGTGGGGAAAAGGAGGTGCGGTTCATGAACAGGTTGTGGAGATTAGAATTGTTACGCCTGCACCTTCTGAACATGGATATGCCAAGCTTCATATTCTAACAGAAGAAGATCAACATCTCAATGCAGCAAAAGTCTCACTCGGCTTGCTTGGGGTCATTTCACAGATTACTTTCAAACTTGAACCTCTGTTCAAGCGATCCATTACATATGTTACCGAAAACGATTCAAATTTGGAGAATAAAGTCATAACATTTGGACAAAAACATGAGTTTGCAGATATAATTTGGTACCCAAATCAACACAAGGCTGTATACCGTGTTGATGATCGTGTTCCAATTCATACATCAGGCAATGCTGTTTACGATTTCATCCCTTTCCGTCCGACTCCTGCAATTCAATTACTACTCCGCAGAACCACAGAGGAAGCTGAGGAGTTTTATGGTGATTCAGAGGGGAAATGCTTAGTCGCAAAGACAGAAACGAATTCCCTTATAGCCAGTGCTTATGGACTAACTAACAATGGTTTAGTCTTCTCCGGATTCCCTGCAGTTGGATTTCATAACCACATTCAGGCTTCTGGGTCATGCCTGGGCAGTGATAGGAATACAAAGATAGCAACTTTCTGTCCCTGGGACCCTAGAATCAAAGGAGATTTCAATCACAAAACAACATTTAGCATTGGGTTGTCTATGGTAAAGAACTTTATTGAAGATTTGAAAAAGCTGGTTGAATTGGAACCAAAGGCATTTTGTAGCATAGAGATGCACAACGGGATTCTGATGCGTTATGTGAAGGGTTCAAGTGCATACCTAGGGAAACAGGAGGATGGCGTAGACTTTGATATCACATACTACCGTAGCAGAGACCCAATGGCTCCTAGGCTGTACGAAGACATTTTTGAAGAGATTGAGCAGATAGGGATTTTCAAATATGGAGGTTTACCACATTGGGGTAAGAACAGGAATGTGGCATTTGAAGGAGTGATGAACAAGTACATAAATGCAGACAAGTTTCTGAAGGTGAAAGATGAGTATGATCCAGAAAGGCTATTCTCCAGCGAGTGGTCAGACCAAGTTCTTGGTCTGAAAGAAGGGTTGATGAAGGTCTCTGCATATGCTCCAATCACAACCATTGTGCACCAACCAAAGGCTACTTTTGCAGGCCAGGCAAAGTCTACAAGAAAGCAAGGCGAACGATGTAGGAGTGGTTCTCTTCCTCCTACCATCAAGTGGAGGTTTCCGATTATCGAATTGAATTGGTCGACGGAGAATGAACAGAGAAAAGCAGAGAAAACAGAGGATGGAGTTGAAGACTTGGAATTGAAGGAAAGGGTATGTGTGTCTGATAGGATTAGAAGACAGAGATTAAGCAACCGGAAAATGATGAGATATTGGGAGAAGAATAGGAATCAAGATGGGTGGAGCGGTTGGAATTCAAAACCGAATTGA 1953 0.4434 MSQLSFKPTPFLLFFLGFYVALSTPEDPINCTSHKTNCTITNFCGTFPDRSICKAQKVFYPTQEEDILRVVASATRKGKKMKVATSSSNSIPKWVCPEGHNGWLISTKYLNRVMEIDAEKRTARVQSGVTLKQLMEEAAKAGLALPYTPYWWGLTMGGILGTGAHGSSLWGKGGAVHEQVVEIRIVTPAPSEHGYAKLHILTEEDQHLNAAKVSLGLLGVISQITFKLEPLFKRSITYVTENDSNLENKVITFGQKHEFADIIWYPNQHKAVYRVDDRVPIHTSGNAVYDFIPFRPTPAIQLLLRRTTEEAEEFYGDSEGKCLVAKTETNSLIASAYGLTNNGLVFSGFPAVGFHNHIQASGSCLGSDRNTKIATFCPWDPRIKGDFNHKTTFSIGLSMVKNFIEDLKKLVELEPKAFCSIEMHNGILMRYVKGSSAYLGKQEDGVDFDITYYRSRDPMAPRLYEDIFEEIEQIGIFKYGGLPHWGKNRNVAFEGVMNKYINADKFLKVKDEYDPERLFSSEWSDQVLGLKEGLMKVSAYAPITTIVHQPKATFAGQAKSTRKQGERCRSGSLPPTIKWRFPIIELNWSTENEQRKAEKTEDGVEDLELKERVCVSDRIRRQRLSNRKMMRYWEKNRNQDGWSGWNSKPN 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00087 650 FunFam L-gulonolactone oxidase 5 112 230 - -
Vimu10g00087 650 Pfam FAD binding domain 56 188 IPR006094 GO:0050660
Vimu10g00087 650 Gene3D - 390 490 - -
Vimu10g00087 650 Pfam D-arabinono-1,4-lactone oxidase 392 526 IPR007173 GO:0003885|GO:0016020
Vimu10g00087 650 Coils Coil 590 610 - -
Vimu10g00087 650 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 230 IPR036318 GO:0050660
Vimu10g00087 650 Gene3D - 112 230 IPR016169 -
Vimu10g00087 650 PANTHER GULONOLACTONE OXIDASE 23 532 - -
Vimu10g00087 650 ProSiteProfiles PCMH-type FAD-binding domain profile. 51 231 IPR016166 GO:0071949
Vimu10g00087 650 NCBIfam FAD-dependent oxidoreductase 25 534 IPR010030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00087 Vimu-Chr10 496814 501401 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00087 K00103 - gmx:100806810 847.04