Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00078 ATGACGGAGATGGAGATTGAGGGTGAGAAACAGCAGAAGTTCAATGTGGACCTCGGCAACCTCATGGCTTTCGACTGCAATCACACTTTCCCCTCTCAACCACCTCTTTCCAGGGAGGAAATCGTCAAGCAGTGTTTGCTGAAAGGCACTCACTTGGTTCAGGCTATCGCAGATGCCCTCTTCACCTTACCATCAACCGAAGATGTAGATGGCCCCCTTGTCAACTTGCCTACGCCACTAACTAAATTGCCAAGAGAAAAACATCTTCCAAAACCTAAGCCTCCTACTAAATGGGAAGTTTTTGCCAAAAAGAAAGGCATACAGAATCGGAAGAAAGACAAGATTGTGTATGATGAACAATCTGGAACCTGGAAACGGAGATTTGGGTATGATCGTGCAAATGATGAAGACGCTGTACCTATCATTGAGGCAAAAGAAACTGATGATCCGGCAGAGGATCCTTTTGCAAAAAGAAAAGAAAATAAGAAGAAAAGAATTGAAAAACAAGATAAAAATCGACTACAGAACTTGAAAGAAGCTGCTAAATTTGGTGCTTTACCAAGCCATGTTCAGTTGGCGGCTACAGCTTTGCCTATAACAGGAACTCAGGCTGCGCCCAAGAAAGTTACAAAGGATGAACTAGGTAATGTAGCAGGAATCGCAGCAACTGCAACAGCCAGTGGTGGGAAATTTGACAAGAAATTGCCGGGTGAAAAGCCTGCAAAACATAAAGGAAAATATCGAAAGTTCCTGCCAGTGGTGGAGGGAACCGGGATAGGATCACAAGAGAGGGAGCAAACTGAAAAAATATTGAACAAAATCATCTCCAAGAATTCTCATAACATACTAAATGTTGAAAAGGCCGTCACTATGCACAATGTGAAGAAAGAGAAGAAACGAAGGAGCGAGAAAGGGAAGGCTTCACCAGCTGACAACAAATTGAAACCTGAGAAAAAGTCTTTTAAAAAGGGAAATTTCAAGAAAAAGGGAGATTTCAAGAAAGGGAAAGGGAAAGGAAAATAA 1023 0.4233 MTEMEIEGEKQQKFNVDLGNLMAFDCNHTFPSQPPLSREEIVKQCLLKGTHLVQAIADALFTLPSTEDVDGPLVNLPTPLTKLPREKHLPKPKPPTKWEVFAKKKGIQNRKKDKIVYDEQSGTWKRRFGYDRANDEDAVPIIEAKETDDPAEDPFAKRKENKKKRIEKQDKNRLQNLKEAAKFGALPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLPGEKPAKHKGKYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKGKASPADNKLKPEKKSFKKGNFKKKGDFKKGKGKGK 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00078 340 Pfam Ribosome biogenesis regulatory protein (RRS1) 14 177 IPR007023 GO:0005515|GO:0005634|GO:0042254
Vimu10g00078 340 MobiDBLite consensus disorder prediction 320 340 - -
Vimu10g00078 340 PANTHER RIBOSOME BIOGENESIS REGULATORY PROTEIN 10 279 IPR007023 GO:0005515|GO:0005634|GO:0042254
Vimu10g00078 340 MobiDBLite consensus disorder prediction 303 319 - -
Vimu10g00078 340 MobiDBLite consensus disorder prediction 289 340 - -
Vimu10g00078 340 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu10g00078 Vimu-Chr10 459731 463035 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00078 K14852 - gmx:100527796 536.184