Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00051 ATGATGAGAAATCTCTCTGCATCTCATTCCTTTGGGCTTTTCGTCACCTCACCCATCTTTCTTGCTAATAACCGTTCTTCTCTCACTCTCTTCTCACCTTCCACTCGAAGATTTCCTCCTTCCATTCAATGCGCGGCTCAATTCCGTCCCTGCATCGACATCCACAAGGGAAAAGTGAAACAAATTGTGGGGTCAACCTTGCAAGACTTGAAAGGGGGCGATGGGTCGGATCCTGTGACCAATTTTGAGTCGGATAAGTCGGCTGCTGAATATGCTACTCTTTACAGACGAGATGAACTCACGGGTGGCCATGTCATCATGCTTGGTGCAGACCCTTTGAGCAAAGCTGCTGCCTTGGAAGCATTGCATGCTTATCCAGGTGGTCTACAAATTGGAGGGGGAATAAATTCTGACAATTGTTTGAGTTACATAGAAGAGGGAGCAAGCCACGTCATTGTGACTTCTTATGTATTCAATGATGGACAAATGGATATTGGAAGGCTAAAAGATCTTGTTCAAATTGTTGGCAAAGAGAGGCTTGTGTTGGATCTCAGTTGTAGAAAAAAGGATGGTAAATATGCAATTGTCACTGATAGATGGCAGAAGTTTAGTGATGTTTTTGTTGATCCTGGTGTAATGGAATTTCTTGCCAACTTTGCTGATGAGTTTTTGGTTCATGGTGTTGATGTTGAAGGGAAAAAGTTGGGAATTGATGAAGAGCTTGTTGCTTTGCTTGGCAAGCATTCACCTATTCCTGTTACTTATGCTGGTGGTGTGACTGGAATGGCTGACCTAGAGAGGATTAAAAGTGCGGGAATGGAACGCGTGGATGTAACTGTGGGTAGTGCATTGGATATTTTTGGAGGAAACATGTCTTACGAAGAGGTTGTAGCTTGGCATGTCCAGCAAAGGGCCCATGTAGTTTGA 927 0.4401 MMRNLSASHSFGLFVTSPIFLANNRSSLTLFSPSTRRFPPSIQCAAQFRPCIDIHKGKVKQIVGSTLQDLKGGDGSDPVTNFESDKSAAEYATLYRRDELTGGHVIMLGADPLSKAAALEALHAYPGGLQIGGGINSDNCLSYIEEGASHVIVTSYVFNDGQMDIGRLKDLVQIVGKERLVLDLSCRKKDGKYAIVTDRWQKFSDVFVDPGVMEFLANFADEFLVHGVDVEGKKLGIDEELVALLGKHSPIPVTYAGGVTGMADLERIKSAGMERVDVTVGSALDIFGGNMSYEEVVAWHVQQRAHVV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00051 308 NCBIfam phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 47 300 IPR011858 GO:0000105|GO:0003949
Vimu10g00051 308 PANTHER 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE 41 304 IPR044524 GO:0000105|GO:0003949
Vimu10g00051 308 FunFam 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic 46 304 - -
Vimu10g00051 308 Pfam Histidine biosynthesis protein 50 284 IPR006062 GO:0000105
Vimu10g00051 308 SUPERFAMILY Ribulose-phoshate binding barrel 47 299 IPR011060 -
Vimu10g00051 308 Gene3D Aldolase class I 46 304 IPR013785 -
Vimu10g00051 308 CDD HisA_HisF 47 298 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00051 K01814 - gmx:100793426 529.25