Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00045 ATGCCTTTGTTTGCAGAGATTACGAATGCGCAACTATCCTTCCGTTATTCTCTGACGTTGAAGGCCCCAATGCCGTACCATGCGCCCAGAGGCTCCTGGATTTGCTTGGACAGCCTTAGGAACAGAAAGGATGCTAAGCTGAATGTGATTAAGGCTGTTGCCACCTTCGAACCTAACACTGTTGCTGCAAAACCACACTCCAACCACTTGGATGTAGTTCCTCTAACCCCTCCTTCCTTTGACCTTCAATTTTCCGACCAAGAAACCCAACAACCTCAACCCGATGACAGGGAGCGGTTGAGAAGAATGAGGATATCCAAAGCTAATAAAGGAAACACGCCCTGGAACAAAGGAAGAAAGCACTCTCCTGAGACTTTACGCAAAATCAAAGAAAGAACAAGGCTCGCGATGCAGAACCCTAAGATCAAAATGAAGCTCAGTAAGCTTGGCCACTCACAAACCACAGAAACAAGAATGAAGATTGGTGCTGGAGTGAGAAGGCGATGGGAAGAGAGGCGTGAAAAGAAGAACGCAGCGGAGTCTTGCTGCTTTGAGTGGAAAAATTTAATTGCAGAAGCTTCTAGGAAAGGCTTTGTTGGTCAGGAAGAGCTGCAGTGGAATTCTTATGAAACCTTGGATGAACAGCTGAAGCAGGAGTGGTTGACGAGTGTTGACCAAAGGAAACAAATGATAAAGACATCAGGTGGCAAAAGAGCACCCAAGTCCCCTGAGCAGAGAAGGAAAATTGCAGAAGCCATTAGTGCGAAATGGGCTGATCCTGTAAGTCTGTATGCTAAATACATTGAGGAATACCGTCAAAGAGTTTATTCTGCATTGTCCAAGTATCATGGCACTGAAGTTGGAGCTGAAAGGAAAACTAGAAGAAGGCCAAAAGATGATACCCAACCTACCAAGAAGAAACCTACAAAAAAAAGAGACAGTGTTACTAGTGCTCATGTTAAGAATGACTCCAAAACCCATAAGCCCATCCTGTTGAAAAAAAGTAAATCCCCAGCCTACAAGGATCCTTTGGTGAATTCTAAGCTTGAAATGATAAAGAATATTAGAGCGCAGAGAGCTGCATCGGAAACCACACAAATTCAAGCCATTGAACGAGCAAGACTATTGATTGCTGAAGCTGAGAAAGCTGCCAAGGCACTGGAGGTTGCTGCGACAAAGAGTCCTTTTGCACAGTCTTCTTTGATAGAGACCAGAAAGCTTATAGCTGAAGCTATTCAATCACTGGAATCCATTGATACACAAGCTATAACTGACAGTAATGTTCCTTCGGTTGGTTTGAGTGAGGTCAATCAAGAAAAAGAATCAGCATCTGAAGTTCTAAACCAATCAAAATTGGCCCCAGTAAATGGACACACAACATTATCACCAATGGACTACAAGTTCCCTGAAAATTTTAGCAAATTTTCCTTGGAGAAGCCAGTTAATGGTGAACCTGAACTTCTCCTAACCAATGGCTGCGCATCCTTACCTTTTAGTTTGAATAGTCAGATAAGCGAGTCTAGGCCATCTAATCAACAAAGGGAAGCTGAACAGGATCAGAGAAGTGAATACGAAACAGAGCCTTCTCCAATAGTGATGGGAATTCAGTCCCTTGAAAATGAGACAGTGTCTAGATCACCTATAGTAGTATCTAAAAGATGGGTTCGCGGAAGGCTAGTCGAAGTGGCGGAAGACAAACAATAA 1704 0.4349 MPLFAEITNAQLSFRYSLTLKAPMPYHAPRGSWICLDSLRNRKDAKLNVIKAVATFEPNTVAAKPHSNHLDVVPLTPPSFDLQFSDQETQQPQPDDRERLRRMRISKANKGNTPWNKGRKHSPETLRKIKERTRLAMQNPKIKMKLSKLGHSQTTETRMKIGAGVRRRWEERREKKNAAESCCFEWKNLIAEASRKGFVGQEELQWNSYETLDEQLKQEWLTSVDQRKQMIKTSGGKRAPKSPEQRRKIAEAISAKWADPVSLYAKYIEEYRQRVYSALSKYHGTEVGAERKTRRRPKDDTQPTKKKPTKKRDSVTSAHVKNDSKTHKPILLKKSKSPAYKDPLVNSKLEMIKNIRAQRAASETTQIQAIERARLLIAEAEKAAKALEVAATKSPFAQSSLIETRKLIAEAIQSLESIDTQAITDSNVPSVGLSEVNQEKESASEVLNQSKLAPVNGHTTLSPMDYKFPENFSKFSLEKPVNGEPELLLTNGCASLPFSLNSQISESRPSNQQREAEQDQRSEYETEPSPIVMGIQSLENETVSRSPIVVSKRWVRGRLVEVAEDKQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00045 567 MobiDBLite consensus disorder prediction 284 337 - -
Vimu10g00045 567 MobiDBLite consensus disorder prediction 285 330 - -
Vimu10g00045 567 MobiDBLite consensus disorder prediction 502 538 - -
Vimu10g00045 567 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 71 495 - -
Vimu10g00045 567 Pfam NUMOD3 motif 104 129 IPR003611 GO:0003677
Vimu10g00045 567 Coils Coil 370 390 - -
Vimu10g00045 567 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00045 Vimu-Chr10 296882 299671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00045 - - gmx:100306569 764.222