Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00023 ATGGCATCCCTGGTGCCTGGAGTTCTACTGAAGCTTCTCCAGAGTATGAACTCTAACGTAAAAGTACGCGGGGAATATCGCTCTGTTCTTCTGCAGGTTATCAGCATCGTGCCCGCACTATCTGGCTCTGAGTTATGGCCTAACCAAGGTTTTTTCATAAAAGTCTCCGACTCTTCTCACTCAACCTATGTCTCTCTTTCGAAGGAAGACAACGAACTCATATTGAATAATAAGCTGCAACTTGGTCAATTCTTTTATGTGGATGGAATCGAGGCTGGCACACCTGTCCCTATTCTTGTTGGTGTTAGAACACTCCCTGGACGCCATCCTTTTGAAGGCAATCCCAAGGACTTAATGCAAATGTTAGAACAATCAGAGCATCCTCATAGTGATGGATATAATGGTTCCAAATTCACGGATTTAACAGAAGCCAAAGAGAATCCAAATTCAAGTCAGAAGATTGTTATTAAAGAGGAAAAACTAGGTGTTTCATCCAGGTATATGCAGGGTGTTCTGAATCCAAACTCAAGGCTTAGCGGACTAGAGACTAATGTGGGAAGCAAAGGAAATGATCTAGAAATTGGCGCAAATGGTAAAAGGGTGGGAATTGCGAAAGGAAAGCAACTAGACATCAAAGATTTTAGTATCACAGGTGTGCTTCCGGTGACTCAAATTGACACTCGACTTGAAGTATTTTCACCAAAGCAAGACGTTACTCAATCTAACATTCGGGAAGCTGTCACAACACCTTCTGGACGCACTTCTGTCAAACACAATAGTTCTACTAAACAGGAAAATTTGAATATGAATTTGTTGTCTCGTGTTAAAGATAAAAGCAAGAACGCTGAGACAATTCCATGGTCTTCTTTGCCAACCAAACTTCTCAGGCCCGGAAAGGTTATTCTTAGAAAGAAACATCTAGCGTCTCAGGTTGTAGTACAAGCGCAAAAAGAAGCGTTTGCAGCAACAACCACAGTTAAATGCCTGAGTATGTTCGCCAACGTCTGTTCTTTCGCATCTTCAGCGAACCCTCATGCCACACTAAGCAAATTTTTTGCTCTCCAGCAACTCATGGACCAGCCAAATGGTACGGCTGATCAATTGAATGATAAATCACTTCAACTATACAGAATTTCAACTCCCTTAGAAAAGCATAAATCTGGCACGACAGCAGGTTTGATGCCAGCTAAAAGCACGGCAAAGTCTTCAAAACCTTTGACCGAACTATCAGGGATTGAGAAACAAGAATGGGCCAAAGGGGGTGGTATGAAAGAGATCAACGAGCTGAGAGAATTACTTTTAAATGAAACAAGATCGTGGTTTCTGATGTATCTGGAAAAGACATTAGATGCTGGGTTTTCCGTAAGCTCCCGTGAGAAGAGCAAGGATAGTAAGGATGTTGCAGGGAGACAAATTGAGCAAGCCAACAATATAGCTCTAACACTGTCACACCTTAAGCATGCAAACGAGTGGCTGGACAAACTGAGGAGCAGTTGCAACACGGAAAGTGAAGGGATGGTGGAGACCGTTGACAGATTGAAGCAAAAAGTTTATTCTTGTTTGCTTGTACATATTGATTCCGCTGCTTTAGCATTGGGGAACCGAGCCTGA 1611 0.4258 MASLVPGVLLKLLQSMNSNVKVRGEYRSVLLQVISIVPALSGSELWPNQGFFIKVSDSSHSTYVSLSKEDNELILNNKLQLGQFFYVDGIEAGTPVPILVGVRTLPGRHPFEGNPKDLMQMLEQSEHPHSDGYNGSKFTDLTEAKENPNSSQKIVIKEEKLGVSSRYMQGVLNPNSRLSGLETNVGSKGNDLEIGANGKRVGIAKGKQLDIKDFSITGVLPVTQIDTRLEVFSPKQDVTQSNIREAVTTPSGRTSVKHNSSTKQENLNMNLLSRVKDKSKNAETIPWSSLPTKLLRPGKVILRKKHLASQVVVQAQKEAFAATTTVKCLSMFANVCSFASSANPHATLSKFFALQQLMDQPNGTADQLNDKSLQLYRISTPLEKHKSGTTAGLMPAKSTAKSSKPLTELSGIEKQEWAKGGGMKEINELRELLLNETRSWFLMYLEKTLDAGFSVSSREKSKDSKDVAGRQIEQANNIALTLSHLKHANEWLDKLRSSCNTESEGMVETVDRLKQKVYSCLLVHIDSAALALGNRA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00023 536 PANTHER EXPRESSED PROTEIN 1 533 IPR010341 -
Vimu10g00023 536 Pfam Plant protein of unknown function (DUF936) 4 148 IPR010341 -
Vimu10g00023 536 Pfam Plant protein of unknown function (DUF936) 238 372 IPR010341 -
Vimu10g00023 536 Pfam Plant protein of unknown function (DUF936) 398 532 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00023 Vimu-Chr10 176509 178771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00023 - - pvu:PHAVU_009G262500g 889.026