Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04140 ATGGCGAATTGGATCTCCTCCAAACTCAAAGCCGCCGAGAACATTCTCCATCAGATCGATCAGCAAGCGGCGGAATCGCTTCGGAAGAACGACGAGAGGCTTCAATTGGAGGAACAAGCCACTATCGATGCTCCTGTGAAACCAGGGAGCGGTGTGCCTCTCAAGGATCAATTGAAGAATCAATTGAAGAAGAAAATCCCTGAGAACAATGATTATAATGGAAAATTGCGCAGTGATCCTAATTTCAGCGTACTTAAAAAAACTACATCACCGATTGTACCCAAGCATTCCCCCAAATCTATCCCTACGATCACGGACGGTGATTGGACTGAACTTCTTAGTTCACCTACTCAGCCTACAGCTTCTGCTTCTGGGGGAAACCACGGTAATGGTGTACCCGCAGCTCGGTTTTTAAGGCAAAATAGTAGGAAGCAGAAGGGTTCATCTTCATCTGTGTCTGATATAAAGAGAAATCAGAAAAGTGGTAACAGTGGTTCAACTCCAAGGTCTTTGCAGAGATTAGATTCTGTTAAAGGAGCTAAATTGAGTGGAAAAGCCAGTGATGATGGGAAGGAATCTACCTCGCCGGGTTCGAGCAATAGGCAGTCTAATGTGGAATTAGAAACTGATGGCGCTAGTGGACAGGAATATGTTAGCAATAGCAGTCCTGATAAGCCTGTGATTGAGACCAACAATAAGGAAAAGGAAGATCATGAGCACCGATTTAGTTATAGGGACTTCTCTTCACCTGAATCTTTACGGGAAGATGACAAAAATATTGTCGCAGAGGCAATACCAGTAAGGGGAGTTGATAAAGTGCGTGCAGCTAAGATCCCAGTTGATGTTGGCAGTCGTTTGAAAAATGTGATAAAAGGGAGGCGTGAGCTTAATTCAGCGTCTGATAATTTAACATCCAATGATTTGAAAAGGGGTTCTTCCATGGCAAGTGGTGAAAGTTCTGATTCAGATACAGAATCTGGTTCAACATCTGATTCCGAAAGTGAACATGAGAGGGAAGAAAGGAGAAAGAAGAGAGAAAGGATCCTAGCTGAGAGAGCAGCAGCTAATGCAATGATTGCTATCAAGGAAAAGGAGAATATAGCGGCCAAATTAGAGGGGGAGAAACAAAGTCTAGAGAAAATACTTGAGGAGCGAGCTAAACAACAGGCACAAGAGGCTTCACAGCTTCAGAGTACTATGATGGAAACAATGGAAGCTGTTGAGTTAGAAAAGCAAAAACATAATAATACTAGAATGGAAATTCTTACGCGGTTAGCTAAACTGGAGACTGCTAATGCTGATCTTGCAAGATCCCTCGCAGCTGTACAGTGGAACCTTGAAGTAGAGGCCAAACAAGTAGCAGAACTCAGACAAAACATTGCATTGAAAGAATCAATTCTTGAAGAGCTCAAAAAGAGCACGAGGAATCCTCATCAAACTGGAGCTTTACGAAATCAACTAGCTTCAAAAGGAGTTGAGTTTGAACGAGAAATTCTTGAGGCCGAGCACTCTTTTGTTAATGATAAAGTTGCACAGTTACATGAAAAGGCAAGGAAGCTAGAAGCTGACATCGAAATGACAAGGAAGGAGATAGAAGAACCGTCGGAAGTAGAGTTTGAGCTTAAGCGAAGGCTTAATCAAATGACTGATCATTTAATACAGAAACAATCTAAGGTTGAATCACTCTCTTCTGAGAAGGCAAGCCTTACATTTAGAATTGAGCAGGCAGTATCAAGGTTGCTGGAGGAGAACACGTCAGTGTCAGCTATGAATCCTGCCTCATCATCAAGTGACTTAGAATCTGGAATGTGGGAGCTCTCTAATTCAAAATTGAAGCCTATGTTAAAAGCCAGAATTCACTCTGGCAAAAAACAGCTGGGGTCATTGCTTCAACAATTAGATTATATTTTCGTGACTGGTGCTCTTGTTTTAAAAAGGAACTCAACGGCCAAACTCTGGGCTGTGATTTACCTTGTTTGCCTTCATTTGTGGGTGATTTACATTCTGACATCACATTCTGGCCCATCGGATGAAGGTAAATCTGGTGCTGTGATCTCATTGGAGAACATCAATAACACGGGAGGAGTATGA 2091 0.4242 MANWISSKLKAAENILHQIDQQAAESLRKNDERLQLEEQATIDAPVKPGSGVPLKDQLKNQLKKKIPENNDYNGKLRSDPNFSVLKKTTSPIVPKHSPKSIPTITDGDWTELLSSPTQPTASASGGNHGNGVPAARFLRQNSRKQKGSSSSVSDIKRNQKSGNSGSTPRSLQRLDSVKGAKLSGKASDDGKESTSPGSSNRQSNVELETDGASGQEYVSNSSPDKPVIETNNKEKEDHEHRFSYRDFSSPESLREDDKNIVAEAIPVRGVDKVRAAKIPVDVGSRLKNVIKGRRELNSASDNLTSNDLKRGSSMASGESSDSDTESGSTSDSESEHEREERRKKRERILAERAAANAMIAIKEKENIAAKLEGEKQSLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEILTRLAKLETANADLARSLAAVQWNLEVEAKQVAELRQNIALKESILEELKKSTRNPHQTGALRNQLASKGVEFEREILEAEHSFVNDKVAQLHEKARKLEADIEMTRKEIEEPSEVEFELKRRLNQMTDHLIQKQSKVESLSSEKASLTFRIEQAVSRLLEENTSVSAMNPASSSSDLESGMWELSNSKLKPMLKARIHSGKKQLGSLLQQLDYIFVTGALVLKRNSTAKLWAVIYLVCLHLWVIYILTSHSGPSDEGKSGAVISLENINNTGGV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04140 696 MobiDBLite consensus disorder prediction 297 327 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 189 227 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 228 258 - -
Vifa6g04140 696 Coils Coil 9 29 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 74 96 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 103 127 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 297 346 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 329 346 - -
Vifa6g04140 696 Coils Coil 453 473 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 64 258 - -
Vifa6g04140 696 PANTHER GOLGIN-84 1 679 IPR019177 GO:0007030
Vifa6g04140 696 Coils Coil 354 399 - -
Vifa6g04140 696 Pfam Golgin subfamily A member 5 451 670 IPR019177 GO:0007030
Vifa6g04140 696 Coils Coil 503 530 - -
Vifa6g04140 696 MobiDBLite consensus disorder prediction 141 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04140 Vifa-Chr6 1362226117 1362232765 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04140 - - gmx:100803473 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04140 6 1362226117 1362232765 Vifa6g04140 6 1362226117 1362232765 ECH