Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04136 ATGGGCACTGTTATTGACTCTCATTTCTTAGCCCTCACTGCCATAATCACCATTTTTTATCAGCTTCTGTTTTTCATCGTCACTGCACTTCTCAAATTCGATAAGGTCACTGATTTTGCAGGAAGTACCAATTTCGTTATACTCGCTGTTTTGACCTTACTTCTCAAAGGCTCGTGGCATTTTCGTCAGATTATTCTCACTCTTTTTGTTGTATTATGGGCTCTTCGCCTCGCTTTTTTTCTCTTACTCAGGATTTTACAGTGGGGAGAGGATCGCCGTTTTGATGAAATGCGCAATAATTTGGCCAAGTTGGCTGTGTTTTGGATGTTTCAGGCTGTCTGGGTTTGGGCTGTGAGTTTACCTCTTACACTGGTTAATGCAAGCGATAGAAATCCTTTTCTAAAGCCCGTGGATTTAATTGGGATGCTTATGTGGGCTGTGGGTTTTATGATTGAAGCTACCGCAGATCAACAAAAATTGAGTTTCAAAAAGTCTTCGCAAAATAGAGGCAACTGGTGCAATGTTGGACTCTGGCAATATACTCGCCATCCTAACTATTTTGGCGAGATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTATACTGAAGAAAGCTGAATGGCTGGTAATCATCGGACCAATCTTTCTCACACTGTTGCTTCTTTTTGTCAGTGGCATTCCACTGCTCGAGGAATCAGCAGACAAGAAGTTTGGCAACCTGGACGGATATAGGGTATACAAACAAAGAACCAGCCCTTTAATCCCATTGCCACCAGGAGTCTATGGAAAGTTACCTGCATGGTTCAAATCAGGTTTTCTCTTTGAATTTCCACTCTACAGTCGTAATTTTCCACCAGAAGAACAAATTTGGTGTAGAACAAGCAGTGGGAAAAGCAGCGATACTTTGAAAATTGAGTAG 924 0.4177 MGTVIDSHFLALTAIITIFYQLLFFIVTALLKFDKVTDFAGSTNFVILAVLTLLLKGSWHFRQIILTLFVVLWALRLAFFLLLRILQWGEDRRFDEMRNNLAKLAVFWMFQAVWVWAVSLPLTLVNASDRNPFLKPVDLIGMLMWAVGFMIEATADQQKLSFKKSSQNRGNWCNVGLWQYTRHPNYFGEILLWWGIFVASTPILKKAEWLVIIGPIFLTLLLLFVSGIPLLEESADKKFGNLDGYRVYKQRTSPLIPLPPGVYGKLPAWFKSGFLFEFPLYSRNFPPEEQIWCRTSSGKSSDTLKIE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04136 307 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
Vifa6g04136 307 Gene3D - 59 258 - -
Vifa6g04136 307 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Vifa6g04136 307 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 4 283 IPR010721 -
Vifa6g04136 307 FunFam 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) 59 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04136 Vifa-Chr6 1361733067 1361735677 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04136 - - mtr:11415765 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04136 6 1361733067 1361735677 Vifa6g04136 6 1361733067 1361735677 ECH