Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04118 ATGGGAGATCGAAGTAACGGTGACGTTCTGATGCTGGAGGCTCCACCGTCTTACGGTAGCAGGTCAAGCAATTCCGACGCCGAAATCATCGACGCACTGCCTTACATCGACGACGACTACAGCGACCCTAGGGTCAAATTCGAAGTCGACCGTCTCGTCGAAGAAGAGATGCGCCGGAGCTCCAAGAAACCCGCTGATTTCCTCAAAGATTTCCCACCTCTTCCCACTTTCAATTTTCAGGAGTATCCAATGATTGGTAGAGAGTATGAGCGTGTGAGAGCTGGTAGGCCTCCAATTTCACTTGATAGGTCCAGATATGACTTGGAGCTGCCACCGATCAATAAAAGGAACGATGAAACTGCTTGGAAACTAGCTCTTCAAAGAGCTCAACGACTACTTCAATATCAGACAATGAGGATGGAAAATTTGGATTTGTTGTTGAAATATGGTCCTGATGCCTGGAAACAGCACAACCTGCGATTGGAAGTATACTTGTCAAGAATGCAGAAATTAGCTCAGGAACAAAATGATAAGATTGAAAAAGTCAACCGTGAAAGGAAATATCATCAGCAAAACACTGCATATGAGCTTAATGCTTTGTCCATCCAATGGAATGAGCTCTGTCTGAAAAATATAAACATCAGAGCTGCGTGTGCTTCAGCTGAAACTCACCTTAATGACCTAAGAAGAGAAGCAGCAGAAAGAGGCTGGAACTTGGACGCTTTCACTGAAAATGGGCAATATGCCAATTCGGCATCATGA 762 0.4488 MGDRSNGDVLMLEAPPSYGSRSSNSDAEIIDALPYIDDDYSDPRVKFEVDRLVEEEMRRSSKKPADFLKDFPPLPTFNFQEYPMIGREYERVRAGRPPISLDRSRYDLELPPINKRNDETAWKLALQRAQRLLQYQTMRMENLDLLLKYGPDAWKQHNLRLEVYLSRMQKLAQEQNDKIEKVNRERKYHQQNTAYELNALSIQWNELCLKNINIRAACASAETHLNDLRREAAERGWNLDAFTENGQYANSAS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04118 253 Coils Coil 165 192 - -
Vifa6g04118 253 PANTHER BCAS2 PROTEIN 26 232 IPR008409 GO:0006397
Vifa6g04118 253 MobiDBLite consensus disorder prediction 1 25 - -
Vifa6g04118 253 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 28 234 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04118 Vifa-Chr6 1354807078 1354815592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04118 K12861 - gmx:100777152 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04118 6 1354807078 1354815592 Vifa6g04118 6 1354807078 1354815592 ECH