Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04110 ATGATTTACAATACAATATTTGCCAAAAGCTTTAGTCGTTATGAGCAGAAAAAGTTGGGATATGGAGCATTTATTGGCTTCTTGCTCATAGTTTTGAGCCTTTGCACAGTGTTTAAGCCTTACTTGGTTCCTATACATGATTTGAACCTGAAGCTCTCTATTGGCGCTGACATCAAAATGTTGATGGTCAATGACACAGGTGGCTCTCTAAAAATAGCCAAAGACATTGTAACAGAAATACTTGTAGAAGGCACTGGCAATTCTCAACATATGATTGAAGATGAAAGAGTTGTACCAAAGAAACCTGTTAATAATGCCACAAGAATCTCTCCACAAATAGCTAAAGTTGAAGATAATGCAATAAAGACTCTCATCAATGAAACCAGCATCTCTCCAACAAAAACTGAAGTTGAAAAAATAGAAACAAGAAAAGTAGAGCAAGAGCAACAATTACAATGTGTTTCAGAAGCAAGAACAGAATATTGTCAAACCCAAGGAGATATCCGAGTGCATGGAAATTCCTCTTCTGTTTACGTTGTGTCACACAAAACAAACAGCTTGGCAGAAAACGTGTCATGGATTATAAGGCCTTATGCTCGGAAAACAGATGCATATGCAATGAGTAGTGTAAGAAAATGGTCAACTAAAGCCAGCAGTAGCAACCAAGTCCCACAGTGCACAAAAAATCACAGTATTCCAGCAGTAATATTCTCTACTGCAGGATACACTGGAAACCACTTCCATGAATTCAGTGACATTATCATTCCACTGTTTTTGACTTGTAAACAATTTAATGGACAAGTACAGCTTATCATAACTGATAAGATACCATGGTGGATTCCCAAACACCAAGCATTTCTTAAAAAGCTGTCCAAGTATGAGATTATGGACATTGATAAAGATGATGAAGTCCACTGCTTCCCTAAGGTAATTGTTGGGCTTAAAAGGTATCATAAAGAGCTAAGCAGTGACCCTCAAAAGTATTCCTATTCTATCAAAGACTTCAGAGATTTTTTGAGAGATTCTTACTCACTAAAGAGAGTTAATGCAATCAAAATCAGAGATATTGGCAATCAAATTAAGAAGCCTAAGCTCCTAATTCTTTCAAGAAAAAGATCAAGAGCCTTCACTAACATAAATCAAATAGCAAAAATGGCTAAAGGGTTGGGTTTCAAAGTAATTGTTATGGAAGCAGGGCAGAACATGTGGAGTATCGCAAATGTTGTGAACTCTTGTGATGTACTAATGGGAGTTCATGGTGCTGGTCTTACTAACATACTTTTCCTTCCTGAAAATGCAATTTTCGTTCAAGTTGTGCCTTATGGTGGGATGCAAGTGGATTGGCTTGCAACAAACGATTTTGCAAAGCCCTCAGAGGATATGAATATAAAGTACTTGGAATATAAAATAAAGTTGGAAGAAAGCACTATTATACAACAATATTCATTAGACCATATGGTTATAAAGGATCCCTCATCAATAGTAAAACAGGGATGGGAAGCCTTTCGGTCAGTGTATTTTGACAAACAAAATGTTAAGCTTGATGTTATTAGGTTTAGACCAACATTACAGAGAGCCCTCGAGTTATTGCATCAATAA 1599 0.3665 MIYNTIFAKSFSRYEQKKLGYGAFIGFLLIVLSLCTVFKPYLVPIHDLNLKLSIGADIKMLMVNDTGGSLKIAKDIVTEILVEGTGNSQHMIEDERVVPKKPVNNATRISPQIAKVEDNAIKTLINETSISPTKTEVEKIETRKVEQEQQLQCVSEARTEYCQTQGDIRVHGNSSSVYVVSHKTNSLAENVSWIIRPYARKTDAYAMSSVRKWSTKASSSNQVPQCTKNHSIPAVIFSTAGYTGNHFHEFSDIIIPLFLTCKQFNGQVQLIITDKIPWWIPKHQAFLKKLSKYEIMDIDKDDEVHCFPKVIVGLKRYHKELSSDPQKYSYSIKDFRDFLRDSYSLKRVNAIKIRDIGNQIKKPKLLILSRKRSRAFTNINQIAKMAKGLGFKVIVMEAGQNMWSIANVVNSCDVLMGVHGAGLTNILFLPENAIFVQVVPYGGMQVDWLATNDFAKPSEDMNIKYLEYKIKLEESTIIQQYSLDHMVIKDPSSIVKQGWEAFRSVYFDKQNVKLDVIRFRPTLQRALELLHQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04110 532 PANTHER GLYCOSYLTRANSFERASE 18 530 IPR007657 GO:0016757
Vifa6g04110 532 Coils Coil 137 157 - -
Vifa6g04110 532 Pfam Glycosyltransferase 61 326 433 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04110 Vifa-Chr6 1353077723 1353080020 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04110 - - cam:101508368 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04110 6 1353077723 1353080020 Vifa6g04110 6 1353077723 1353080020 ECH