Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04023 ATGGTTTGTTTGGTATCTCGAACGGGAAGGGAGTTGCAGAGATACAACAATATGGGTGGCAGACAAGTTGTAGGATGCATACCTTATAGATATAAACAAGACATAGATGGTAATGGAAGCAACGAATTGGAAGTACTAATGATTAGTTCACAGAAAAGTCAAAGACTAATGTTTCCTAAAGGAGGATGGGAACTTGATGAATCTCTAGAAGAAGCAGCTTGTAGGGAATCCCTTGAAGAAGCAGGTGTCATAGGATTAGTTGAGTGTGAATTGGGACAGTGGAATTTCATTAGCAAAAGACATGGAATATACTATGAAGGGTACATGTTCCCTTTGTTTGTGAAGGAGCAACTTGATTATTGGCCGGAGAAATATCTTAGGACAAGAGTATGGATGACTGTTGGTAAAGCTAGAGAAGTTTGTCAACATTGGTGGATGAAGGAAGCATTAGATATATTGGTTCAAAGACTCATTTCTTTAAAGCAACAACAATAA 495 0.3818 MVCLVSRTGRELQRYNNMGGRQVVGCIPYRYKQDIDGNGSNELEVLMISSQKSQRLMFPKGGWELDESLEEAACRESLEEAGVIGLVECELGQWNFISKRHGIYYEGYMFPLFVKEQLDYWPEKYLRTRVWMTVGKAREVCQHWWMKEALDILVQRLISLKQQQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04023 164 Pfam NUDIX domain 42 135 IPR000086 -
Vifa6g04023 164 SUPERFAMILY Nudix 20 158 IPR015797 -
Vifa6g04023 164 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vifa6g04023 164 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Vifa6g04023 164 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 157 - -
Vifa6g04023 164 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Vifa6g04023 164 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Vifa6g04023 164 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04023 Vifa-Chr6 1327475364 1327476215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04023 K07766 - gmx:100800108 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04023 6 1327475364 1327476215 Vifa6g04023 6 1327475364 1327476215 ECH