Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04007 ATGTATCCACCACAAGAAGGAAAACCATCTTACAATCAGCCACAATCAGGCGCTGCCACCGGCTTTCCGGTCAGCTACAATAGCAATACATCCACATACTCTGGCACCACTGCCTCCGATTATCACCCACCTCCTCCTCTGCCTAAACCTATAGTTGAATGGTCTTCCGGTCTTTGTGATTGCTGCTCTGACCCCGGAAAAAGTTGCATCACATTCTGGTGTCCATGTATAACTTTTGGTCAAGTTGCAGAGATCATTGACAAGGGATCCACTTCATGTGGTGCTAGTGGGGCATTGTACACGTTGATATGTTGTGTGATTGGGTGTGGCTGTTTGTATTCTTGCTTCTACCGTTCAAAGATGAGACAACAATATGGTTTGAAAGGAAATGACTGTACGGATTGTCTGATTCATTGCTGCTGCGAGGCTTGCGCCTTGTGTCAAGAATATCGTGAGCTCGAACACCGTGGATTTAACATGGTCATAGGGTGGCATGGAAATGTTGAGCAAAGGACTCGAGGAATAGTCATGGCTTCAAATGCTGCTACAACAACCGCTCCAACTGTCGAATTAGGCATGAGTCGTTGA 588 0.4643 MYPPQEGKPSYNQPQSGAATGFPVSYNSNTSTYSGTTASDYHPPPPLPKPIVEWSSGLCDCCSDPGKSCITFWCPCITFGQVAEIIDKGSTSCGASGALYTLICCVIGCGCLYSCFYRSKMRQQYGLKGNDCTDCLIHCCCEACALCQEYRELEHRGFNMVIGWHGNVEQRTRGIVMASNAATTTAPTVELGMSR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04007 195 NCBIfam uncharacterized Cys-rich domain 53 155 IPR006461 -
Vifa6g04007 195 PANTHER DUF614 FAMILY PROTEIN-RELATED 53 162 IPR006461 -
Vifa6g04007 195 Pfam PLAC8 family 54 152 IPR006461 -
Vifa6g04007 195 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04007 Vifa-Chr6 1321422145 1321423274 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04007 - - gmx:100306298 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04007 6 1321422145 1321423274 Vifa6g04007 6 1321422145 1321423274 ECH