Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04004 ATGAACCTTGAAAAAATGGGAGAGAAACGTGGTCTTGGATCATGGTCCACCGGCTTCTGTGACTGCTTCTCTGATTGCACCTCCTGCTGTCTGACAATGTGGTGTCCTTGTGTTAGTTTTGGAAGAGTAGCTGACATAGTCGATAGAACAAATTCTTGTTGTGTCCAAGGAACAATATTCTGCCTACTTGGTGGTTTTAGTCCATTTCTGTCACTCTATTCCTGCATTTATCGCACCAAACTGAGAGAGCAATATGGGATTGAAGGAAATAGATGTAAAGATTGTATTGCTAGTTGTCTTTGTCCTCGCTTTTCCATTTGTCAAGAGTATCGTGAACTCCAAGCACGTGGATTCGATGTCTCTGCAGGTTGGAAAGGGAACGTGCAAGTGGGTTCCCGCGGTGTCACGACGGTTCCTGCAGTGCAAGGTGGCATGAGTCGTTAG 444 0.455 MNLEKMGEKRGLGSWSTGFCDCFSDCTSCCLTMWCPCVSFGRVADIVDRTNSCCVQGTIFCLLGGFSPFLSLYSCIYRTKLREQYGIEGNRCKDCIASCLCPRFSICQEYRELQARGFDVSAGWKGNVQVGSRGVTTVPAVQGGMSR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04004 147 PANTHER DUF614 FAMILY PROTEIN-RELATED 13 121 IPR006461 -
Vifa6g04004 147 Pfam PLAC8 family 15 112 IPR006461 -
Vifa6g04004 147 NCBIfam uncharacterized Cys-rich domain 14 114 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04004 Vifa-Chr6 1320521991 1320543578 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04004 - - ccaj:109809364 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04004 6 1320521991 1320543578 Vifa6g04004 6 1320521991 1320543578 ECH