Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03983 ATGGCGGGTTCTTCATCTTCCTCCATCATGGACAACCTCTTCCAACGAACCCTCGACGATCTCATCAAATCCATGCGCCTCCACCTCCTCACCGAGTCATCTCTCATCTCCAAATCAATCGAAGACATCCGCCGCGAAATCAAATCCACCGACCCCCAAACCAAATCCACCGCCCTCCAAAAACTCACCTACCTCTCCGCCATCCACGGCGTCGACATGTCATGGGCCGCCTTCCATGTCGTCGAGGTAATGTCCTCTTCTTACTTCTCCCACAAACGAATCGGCTACCACTCCGCCTCGATTTCGTTTCACGATCAAACTCCGGTGATCCTCCTTATCACTAACCAGCTTCGGAAAGACCTTTCTTCTACAAACCACTTTCATGTTTCACTCGCGCTTCATTGTTTATCGAATATCGCCACTCTCGATCTCGCGCGTGATCTTACGCCCGATCTTTTCAATTTGTTATCGTCTTCTAGGGTTTTTGTGAGGAATAGAGCTATTGCTGTTGTTTTGAGGGTTTTTGATAAGTATCCTGATGCGGTTAGGGTTTGTTTCAAACGGTTGGTTGAGAATTTAGAGAGTTCTGATCCTCAGGTTGTTACTGCTGTTGTTGGGGTTTTTTGTGAACTTAGTTGTAAGGATCCGAGGTCGTATCTTCCGTTGGCGCCGGAGTTTTATAGGATTTTGGTTGATTCGAAGAATAATTGGGTTCTTATTAAGGTTTTGAAGATTTTTGCTAGGTTGGCTCCTTTGGAACCTAGATTAGGAAAGAGGATTGTTGAACCGATTTGTGAGCATATTAGGAGATCTGGAGCGAAATCGCTTGTTTTTGAATGTGTGAGGACTGTGATTACTAGTTTGAGTGATCATGAGTCTGCTGTTAAGTTGGCAGTTTCGAAAGTTAGGGAGTTGTTGGTTGATCAGGATCCTAATCTTAGGTATCTTGGTCTGCACGCGTTGTCAGTTGCTGCGCCGAAGCATCTGTGGGCTGTTTTGGAGAATAAGGATGCTGTGGTTAAGTCTTTGGATGATGAAGATTCAAATATTAAAATTGAGTCGTTGAAGTTGTTGATGGTGATGGTCTCTGAGAGCAATGTGGTGGAGATATCTAGGGTGTTGCTTAATTATGCATTGAAATCTGATCCGGAGTTTTGCAATGAGATCTTGGGTTCCATTTTAACCACCTGTGGGAGGAATGTTTATGAGATCGTTGTTGATTTTGATTGGTATGTATCTCTTTTGGGGGAAATGGCGACGATTCCTCATTGCCAAAAGGGTGAAGAAATTGAGCATCAGCTTACTGATATTGGCATGAGAGTTAAGGATGCTAGGTTGCAGCTTGTTCGGGTTGCTCGCGATCTGTTGATTGATCCTGCACTCTTGGGTAATGTGTACTTGCATAGGATATTGTGTGCTTCTGCTTGGGTTGTTGGAGAGTATATACAGCTTGCGAGCGATCCACTTGAACTCATTGATGCTCTTGTACAGCCTCGGGCCAATCTTTTGCCACCGTCAATAAGAGCAGTTTATATCAATTCGGTTCTTAAAGTATTGAGTTTTTGTCTGGACTGTTACATTAATCAAGATGAAGATACTGCAGCCTCATATGGAAATTCGGAAATGTTTGTTGTAAAAAAAGACTCTGAAGCTCCTGAACTAGTGGCAACATGTGAAGGTTCAACTTATGAACAGGATGAGGGCTTTAACCCAAGGCATTCGACTGCCGAATCATCTGATGATCTGTCTGTTGAAAACGACACAGATAGAGTTACTCATTTTTCAAAGAGAAAGTTCACACATGAAACAGTTGTAAGCCTATTAAATCGAATTGAATCAATTTTTGGTTCGCTAACAGCAAATCAGGATGTTGAAGTACTAGAGAGAGCACGAAACATACTTGCCTTTGTACAGTTGATTAAAGCAGAAATAATTGACAACTCTGGTCAGAATTTGGGTGAGAAATATACTCAGGTTTCAACTGTTATCAAATCGATCCGCCATGCCTTTTCCATGGAACTTGGTCCAGTCTCAATAAGTGCACAGGGAAGAGTTGCTGTACCAGATGGATTAGTTCTTAAGGAGAATCTTGATGACTTAAAAGCAATATGTGGTGGTGATATTGAGCCACCTTCGTCTAGTACATTTTACACAGGAGGTCCTCAATTTGGCACTACTTTGGATGGGTCTTCGTCTAATCTGCTGAAAAATGCCGAGTCAGGGCCATCAAATGAATCTACATCCTTGCTTGAACACCGTAAACGGCATGGATTGTATTACCTTGCTTCAGATAAAAGCGAGACTTTTACAGATGATTATCCTCCAGCAAATGACCCCAAGTCAAACAGTAATGAAGCTGACGAGCTAGCCAAGTTGACAGAGCAATCACTTCTTTTGAAGAAAAGGACAAATCAAATGAAGTCAAGGCCTGTAGTTGTGAAATTGGATGATGGGGATGTAGCACCAATTCCATACAAAAGGCCAGAGCCAAGGGACAATTCCCTTTCTGGTGCCATAAAAGATGTTCTTCTAGGAAGTGAAACCCACCCGAGTTTGTCTCTTGATAAGTCATCAACTAAGCGGAAAGGGAAAAAGAAACAAGGCACAGATATTCCATCTGAAATGAAAGAAAATCTAGGTGATGCAGAAAAGCTTGATCCTGAAAATCCCAATTCGAGTAGCAAAAATAAAGAGAGAAGACGGAGAGGTAAAGAGAAGATTGTTGAAGGGGGGGAATCTGATCAGAGGGGAAAGAAAAAAAGTAGCCACCGCCATGGCAGACATAAAACACATCAAAGAGCCAATTCACCCTTAAATGTGGTTTCCCAAACACCAGTAATTCCAGATTTTCTTTTGTAG 2859 0.4257 MAGSSSSSIMDNLFQRTLDDLIKSMRLHLLTESSLISKSIEDIRREIKSTDPQTKSTALQKLTYLSAIHGVDMSWAAFHVVEVMSSSYFSHKRIGYHSASISFHDQTPVILLITNQLRKDLSSTNHFHVSLALHCLSNIATLDLARDLTPDLFNLLSSSRVFVRNRAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPQVVTAVVGVFCELSCKDPRSYLPLAPEFYRILVDSKNNWVLIKVLKIFARLAPLEPRLGKRIVEPICEHIRRSGAKSLVFECVRTVITSLSDHESAVKLAVSKVRELLVDQDPNLRYLGLHALSVAAPKHLWAVLENKDAVVKSLDDEDSNIKIESLKLLMVMVSESNVVEISRVLLNYALKSDPEFCNEILGSILTTCGRNVYEIVVDFDWYVSLLGEMATIPHCQKGEEIEHQLTDIGMRVKDARLQLVRVARDLLIDPALLGNVYLHRILCASAWVVGEYIQLASDPLELIDALVQPRANLLPPSIRAVYINSVLKVLSFCLDCYINQDEDTAASYGNSEMFVVKKDSEAPELVATCEGSTYEQDEGFNPRHSTAESSDDLSVENDTDRVTHFSKRKFTHETVVSLLNRIESIFGSLTANQDVEVLERARNILAFVQLIKAEIIDNSGQNLGEKYTQVSTVIKSIRHAFSMELGPVSISAQGRVAVPDGLVLKENLDDLKAICGGDIEPPSSSTFYTGGPQFGTTLDGSSSNLLKNAESGPSNESTSLLEHRKRHGLYYLASDKSETFTDDYPPANDPKSNSNEADELAKLTEQSLLLKKRTNQMKSRPVVVKLDDGDVAPIPYKRPEPRDNSLSGAIKDVLLGSETHPSLSLDKSSTKRKGKKKQGTDIPSEMKENLGDAEKLDPENPNSSSKNKERRRRGKEKIVEGGESDQRGKKKSSHRHGRHKTHQRANSPLNVVSQTPVIPDFLL 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03983 952 PIRSF AP3_delta 1 944 IPR017105 GO:0015031|GO:0030123
Vifa6g03983 952 MobiDBLite consensus disorder prediction 727 747 - -
Vifa6g03983 952 Pfam Adaptin N terminal region 34 637 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vifa6g03983 952 SUPERFAMILY ARM repeat 35 637 IPR016024 -
Vifa6g03983 952 Gene3D - 5 648 IPR011989 -
Vifa6g03983 952 MobiDBLite consensus disorder prediction 570 586 - -
Vifa6g03983 952 MobiDBLite consensus disorder prediction 846 952 - -
Vifa6g03983 952 MobiDBLite consensus disorder prediction 854 919 - -
Vifa6g03983 952 PANTHER DELTA ADAPTIN-RELATED 6 951 IPR017105 GO:0015031|GO:0030123
Vifa6g03983 952 MobiDBLite consensus disorder prediction 562 586 - -
Vifa6g03983 952 MobiDBLite consensus disorder prediction 727 750 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03983 K12396 - gmx:100815221 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03983 6 1313946726 1313949584 Vifa6g03983 6 1313946726 1313949584 ECH