Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03721 ATGACACCAATGGCATCATCCTCTTCACTCAATTCAATTCCTCTATCCGCTCCTTCCATTTCTTCCCCACTTCGTGCATTCTCCACTCCTCTCTTTCCTCAATCAAATTCCCACTTTCACCAAACCAGGAACCACCATTTTAACTTCACCGTTAAAGTACAAACCCTAGATTTCACCGGTTCGTTCTTCGAAGGCGGATTCGGTTCAGGCGATGATCCGATTTCTCCCGGAACCGGTTTTACAACCGCCGTTGAAGAGAAACCGGAACCGCAATGCCCGCCCGGACTTAGACAGTATGAAACTATGGTGGTTTTGAGACCTGATATGTCTGAGGATGAACGTCTTGAACTGACTCAGAAATATGAAGAGCTTCTTGTTGCTGGAGGTGGTATGTATGTAGAGGTTTTTAACAGGGGTATTATTCCACTAGCATATACCATCCAGACGAAAAACAAGGACGGAGAAACTAACACGTATTTGGACGGCATCTACCTCTTATTCACCTACTTCACAAAGCCCGAGTCCATAACCGCCCTTGAGGAGATGCTAATGAGGGATGATAACGTTATCCGATCAAGTAGCTTCAAGATCAGGATCAGGAAAAGGAAATATTAG 615 0.4504 MTPMASSSSLNSIPLSAPSISSPLRAFSTPLFPQSNSHFHQTRNHHFNFTVKVQTLDFTGSFFEGGFGSGDDPISPGTGFTTAVEEKPEPQCPPGLRQYETMVVLRPDMSEDERLELTQKYEELLVAGGGMYVEVFNRGIIPLAYTIQTKNKDGETNTYLDGIYLLFTYFTKPESITALEEMLMRDDNVIRSSSFKIRIRKRKY 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03721 204 Hamap 30S ribosomal protein S6 [rpsF]. 96 199 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vifa6g03721 204 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 87 202 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vifa6g03721 204 CDD bS6_chloro_cyano 96 197 - -
Vifa6g03721 204 Gene3D - 96 204 IPR014717 -
Vifa6g03721 204 SUPERFAMILY Ribosomal protein S6 96 197 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vifa6g03721 204 Pfam Ribosomal protein S6 98 196 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03721 K02990 - gmx:100305490 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03721 6 1222592576 1222594492 Vifa6g03721 6 1222592576 1222594492 ECH